Helicobacter felistomachi: NHP21005_13370
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Entry
NHP21005_13370 CDS
T10843
Symbol
uvrD
Name
(GenBank) DNA helicase II UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hfi Helicobacter felistomachi
Pathway
hfi03420
Nucleotide excision repair
hfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NHP21005_13370 (uvrD)
03430 Mismatch repair
NHP21005_13370 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfi03400
]
NHP21005_13370 (uvrD)
Enzymes [BR:
hfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHP21005_13370 (uvrD)
DNA repair and recombination proteins [BR:
hfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHP21005_13370 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NHP21005_13370 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
CarD_TRCF_RID
IL15
ArdA
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BEG57649
LinkDB
All DBs
Position
1236724..1238796
Genome browser
AA seq
690 aa
AA seq
DB search
MNLANLLISLNPAQQEAVRHTKGPLLILAGAGSGKTKTLTTRLAYLIGYEGVRPENTLTL
TFTNKAANEMRARALALLGEQHTFAKPKLCTFHSFGSFFLRKILKNEEYAEFLRRNKDFI
IKTPSELRKELKESLLPYKQHYEKPWENDRHFLNFLFRGFSLIKNERIIWDNDCNSVFKK
AYGLYVEHLEKGNCVDYDDLIAFPCKLFKKYPELAKQISQFYQYILVDEYQDTNPLQFKL
LKQLCSTHDNLCVVGDDDQSIYGFRGADINNILEFDRRFKGVKIIKLEQNYRSTPKIVGS
ANQLITHNQHRHKKTLFSQKNQGTDESIKYEHFKETKEEDKFICDKINECRAKNIPYEEI
AILYRLKKLGKELGKTLRQAKIPYTLVGEKDFFEQKEIKDRLAYLRALANRDDDEALVRL
LDKLKGFGKESLKKIQDIATNKRCSIAKAYQEGFFQDFSKAHTHLQGFFTILDNLSSRLM
QLNSPKQALELLADYAQIDKESTADDTDDEVLERIRTLATMFQDFVYESLELKGSVSLQD
FFDQIALETDVPTTDSKHSKGVQCMTVHASKGLEFRVVFIVGLEEGSFPLTMEDIDIEEE
RRLAYVAITRAKEEVYLCSVQEKFYWQDSTPSRFIKEARGLAQALCVGDCVHHEQHGFGM
IRHIEKERLGVSFHHGLVWLLPNSVKKMGS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgcaaaccttctaatcagtttaaaccccgcccaacaagaagccgtgcgccac
accaaagggcctcttttaattttagccggagcgggcagcggcaagaccaagactttaacc
acccgcctagcttatctcatcggttatgagggggtgcgccctgaaaacacgctcacctta
accttcaccaataaagccgccaacgaaatgcgcgcaagggcactggctttgctaggcgaa
cagcacacttttgccaagcccaaattatgcacttttcacagctttgggagtttcttcctt
agaaaaatacttaaaaatgaagaatatgcagagtttttaagacgcaataaggacttcatc
atcaaaacgcccagtgagctcagaaaagagctaaaagaaagcttgctcccctacaaacaa
cattacgagaaaccatgggaaaacgataggcacttccttaactttttgtttagaggtttt
tctttaattaagaacgagcgcatcatttgggacaatgattgcaattctgtctttaaaaaa
gcttatgggctgtatgtggagcacttggaaaaggggaattgtgtggattatgacgacctc
atcgccttcccttgcaagctcttcaaaaaatacccagagctagccaaacaaatcagccaa
ttttaccaatacatcttggtggatgaataccaagacaccaaccccttgcagtttaaattg
ctcaaacaactttgcagcactcacgacaatctctgtgtggtgggcgatgacgaccaaagc
atttacggctttaggggggcagacatcaacaatattttagagtttgaccgccgttttaag
ggcgttaaaatcattaagctagaacaaaattaccgctccacccccaaaatcgttggttct
gcaaaccaactcatcacgcacaaccaacaccgccataaaaaaaccctctttagccaaaaa
aaccagggcacagacgaaagcatcaaatacgaacacttcaaagaaaccaaagaagaagat
aaattcatttgcgacaaaatcaatgagtgtagggctaaaaacatcccttatgaagaaatc
gccatcctttaccgcctcaagaaacttggcaaagagttaggaaagaccttgcgccaagcc
aaaatcccctacacccttgtgggggagaaggatttttttgagcagaaagagatcaaggac
cgcttggcgtatttgcgcgctttggcaaaccgcgatgatgatgaggcgttggtgcgtttg
ctagacaaattaaaggggtttggcaaggagagccttaaaaaaatccaagacatcgccact
aacaagcgttgcagcatcgccaaagcctaccaggaaggcttctttcaagacttttccaaa
gcccacacacacctacaagggtttttcaccattttagacaacttgtcctctagattaatg
caacttaacagcccaaagcaagccctagaattgctcgccgactacgctcaaatcgacaaa
gaatcaaccgccgatgacaccgatgatgaggtcttggagcgcatccgcactttagcaaca
atgttccaagactttgtctatgaatcgttggaattgaagggctctgtgtccttacaagat
ttcttcgaccaaatcgccctagaaacagatgtccccaccaccgactccaaacactctaag
ggggtgcagtgcatgaccgtgcacgcctctaaaggattggagtttagggtggtgtttatt
gtggggcttgaagagggctcttttcccctcacgatggaggatatcgacattgaagaagag
cggcgcttggcttatgtcgccatcacaagggctaaagaagaggtctacctttgcagcgtg
caagaaaagttttactggcaagattcaaccccctctcgtttcatcaaagaagctaggggg
cttgcccaagccttgtgtgtgggtgattgcgtgcaccacgaacaacacggctttggcatg
attagacacatcgaaaaagagcgtttgggagtgtctttccaccatgggcttgtgtggttg
ctgccaaactctgttaaaaagatgggctcttga
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