Helicobacter felistomachi: NHP21005_17210
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Entry
NHP21005_17210 CDS
T10843
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hfi Helicobacter felistomachi
Pathway
hfi03420
Nucleotide excision repair
hfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NHP21005_17210
03430 Mismatch repair
NHP21005_17210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfi03400
]
NHP21005_17210
Enzymes [BR:
hfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHP21005_17210
DNA repair and recombination proteins [BR:
hfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHP21005_17210
MMR (mismatch excision repair)
Other MMR factors
NHP21005_17210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
BEG58033
LinkDB
All DBs
Position
complement(1569127..1571115)
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AA seq
662 aa
AA seq
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MGLNAEQLQATKAPLGANLVIASAGTGKTSTIVGRILHLLESGVDPKQILLLTFTNKASQ
EMKARLAKHTSKAADIEAGTFHAVAYRYLKATDPTLCLKQPREMQTLLKSILEQDHKIKE
DDAYGANHLYDLHSYYINAQSQESFAQWLTQRNAKQADYIERYECALELFNELKREQNYL
DYNDLLLRYKDTMANKPPAFIEVLCDEYQDTNPLQDAVLDALRPQSLFCVGDYDQSIYAF
NGADISIISNFATKYKQARVFTLQKNYRSSRAILSLANKVIANNPRIYPKQLEVVKATNP
STPTLLQYSELFAQYKGIAAHIAKRGGFEDVAILFRNNSSAEGCEAALRELGVPSRRKGG
VGFFDTKEVNLLLDICAFLSYSKDMMATMQVLSYGSGIGSALAKDLYLALQTLGDGHSVQ
GLLKPNRKNPYPQVKRPQMGLFEAIVPLATPTHQVSDAFKDHPLLTHPKLTQAGATFLDQ
LHTLCKTYHPSLPAQNLDHIAKSVWFTQIAQNLARERAKTRDGRMDENLYESALAKIKQR
VVLLMQLATSYKNLRDFLHAMVLGSKEMASGNGVQLLSVHASKGLEFGTVYVIDLMEGRF
PNTKLAKQSGSLEEERRLFYVAVTRAKDHLYLSYAKEDKMKKIVYEPSRFLMEGGLLNSK
NR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttaaacgcagagcaactgcaagccaccaaagcccccctaggggcgaatttagtc
atcgcctcggcgggcacgggcaagacttccaccattgtggggcggattttacatttgctt
gaaagcggcgttgatcctaagcaaatcctcttactcaccttcaccaacaaagccagccaa
gagatgaaggccagacttgctaagcacaccagcaaagccgcagacattgaagccgggact
ttccatgccgtcgcttaccgctacttaaaagccactgaccccaccttatgcctcaagcaa
cctagagaaatgcaaactctgctcaaaagcattttagagcaggaccacaaaatcaaagaa
gacgatgcctatggagcaaaccatttatacgacctgcattcttattacatcaacgcccaa
agtcaagagagttttgcccagtggctgacacagcgcaacgccaaacaagccgactacatt
gagcgttacgaatgcgccctagagctttttaacgaactcaagcgcgaacaaaactaccta
gattacaacgacttgttgttgcgctacaaggacacgatggcaaacaagccgcccgccttt
atagaggtgctgtgcgatgagtaccaagacactaaccctttacaagatgcggttttagat
gctttgcgcccccaaagcttattttgtgtgggcgattacgatcaaagcatttacgccttc
aatggggcggacatctccatcatcagcaacttcgccaccaagtacaaacaggcgcgggtt
tttaccttgcaaaaaaactaccgctccagccgggcgattttaagccttgccaataaagtg
atcgcgaacaatccgcgtatttaccccaagcaattagaagtggtgaaggccaccaacccc
tccacccccactttattgcaatatagcgagctgtttgcgcaatacaagggcatcgcggcg
cacatcgccaagcgcggagggtttgaagatgtggcgattttgtttagaaacaactccagt
gctgaggggtgtgaagcggctttaagagagctaggtgtgccctcaaggcgcaaggggggc
gtggggttttttgacaccaaagaagtgaatttgctcttagacatctgcgcttttttaagt
tactctaaagacatgatggcgaccatgcaggttttaagttatggcagtgggattggcagt
gccttggctaaagacttgtatttggccctgcaaactttaggcgatgggcacagcgtgcaa
gggctgttaaaacccaaccgtaaaaacccctacccgcaggtcaaacgcccccaaatgggc
ttgtttgaagcgattgtgcccttagccacgcccacccaccaagtgagcgatgcctttaaa
gatcacccccttttaacccaccccaaactcacccaagcgggcgctacctttttagaccaa
ctccacaccctttgcaagacttatcaccctagtttgcccgcccaaaacctagatcacatt
gccaaatcggtgtggtttacacaaatcgcgcaaaacctagctagagagcgcgcaaaaacc
agggacgggcgcatggatgagaatttgtatgagagtgccctagccaagatcaagcaaaga
gttgttttgctcatgcaacttgccacaagttataaaaatttgcgcgactttttgcatgcg
atggtgctcggctctaaagagatggcaagtggcaacggggtgcagcttttaagcgtgcat
gcgagcaaggggctagagtttggcacggtgtatgtgatcgacctgatggaggggcgcttt
cctaacaccaaacttgccaaacagagcgggagcttagaagaagagcggcggctgttttat
gtggccgttacaagggccaaagaccacctttacctctcctacgccaaagaggataaaatg
aagaagatcgtctatgagccttcgcggtttttgatggagggggggctgttaaactctaaa
aatcgttaa
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