Hyphococcus flavus: PUV54_00995
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Entry
PUV54_00995 CDS
T08821
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hfl
Hyphococcus flavus
Brite
KEGG Orthology (KO) [BR:
hfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hfl03016
]
PUV54_00995
Enzymes [BR:
hfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PUV54_00995
Transfer RNA biogenesis [BR:
hfl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PUV54_00995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WDI31761
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All DBs
Position
184449..185063
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AA seq
204 aa
AA seq
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MANHLYQGDLPQGLDLGPVVAVDSETMGLNTQRDQLCVVQLSSGDGDAHLVQINRQTYDA
PRLKDLLADPTVLKIFHFARFDIAAFQHWLGVETKPVYCTKIASKLTRTYTDRHGLKDLT
RELMGIELSKQQQSSDWGANELSAAQVEYAAADVLYLHTLKAKLDEMLAREDRTAIAEAC
FDFLPVRAALDLAGWPEIDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcacttatatcagggcgacttgccgcaagggcttgatctcgggccggtcgtc
gctgtcgacagcgagaccatgggcctgaacacccagcgtgatcagctttgtgtggtgcag
ctttcttccggcgacggtgacgcgcatctcgtccaaatcaaccgtcagacgtatgacgcg
ccgcgtctgaaagacttacttgctgacccaacagtgctgaaaattttccacttcgcccgt
ttcgatatcgccgcctttcaacactggcttggggttgaaacgaaacccgtctactgcacg
aaaatcgcatcaaaattgacgcgcacctacaccgatagacacggactgaaagacctgaca
cgcgagttgatgggcatcgaactctcaaaacaacaacaatcttcggattggggagcaaat
gaactttcagcggctcaagtcgagtacgcggctgcggacgtcctttacctgcacacgctt
aaagcgaaactcgacgaaatgctcgccagagaagatcgcaccgccatagctgaggcgtgc
tttgattttctgcctgtccgggctgctctggatttggctggatggccggaaattgacatt
ttcgcccattcctga
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