Hyphococcus flavus: PUV54_01240
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Entry
PUV54_01240 CDS
T08821
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hfl
Hyphococcus flavus
Brite
KEGG Orthology (KO) [BR:
hfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfl03032
]
PUV54_01240
03036 Chromosome and associated proteins [BR:
hfl03036
]
PUV54_01240
03400 DNA repair and recombination proteins [BR:
hfl03400
]
PUV54_01240
DNA replication proteins [BR:
hfl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PUV54_01240
Chromosome and associated proteins [BR:
hfl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PUV54_01240
DNA repair and recombination proteins [BR:
hfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PUV54_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HC2
HU-CCDC81_bac_2
DUF6465
MCCD1
Motif
Other DBs
NCBI-ProteinID:
WDI31810
UniProt:
A0AAF0CBT7
LinkDB
All DBs
Position
complement(229993..230424)
Genome browser
AA seq
143 aa
AA seq
DB search
MAVRRKTTKKKTPARKAPAKRKTAAKKKTATRKAPARKTAAKKKATKKALPDTLTYKHLA
AELSEAHELPKKQVEELLSDYVDRIGGYLKKGKKLRIAGLGILQVRHRAARWGRNPATGE
KIRIKASKKVAFRVAKDLKERVL
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggccgttagacggaaaacaacgaagaagaaaacgccagcgcgcaaggctccagccaag
cgtaagacagctgcgaaaaagaaaaccgcgacacgcaaggcgccagcccgcaaaaccgct
gcaaagaaaaaagctacaaagaaagcgttgccggatacgctgacatacaagcacctcgct
gcagaactttccgaagcccacgagttgccgaaaaagcaagttgaagagcttctttccgat
tacgtcgaccgcattggcggctatctgaaaaaaggcaagaaactgcgtatcgccggtctt
ggcattcttcaggttcgtcatcgcgccgcgcgctggggccgcaaccctgcgacgggcgag
aaaatccgcatcaaagcgtcgaagaaagttgctttccgcgtcgctaaagacctcaaagaa
cgcgttctttaa
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