Hyphococcus flavus: PUV54_05175
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Entry
PUV54_05175 CDS
T08821
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hfl
Hyphococcus flavus
Brite
KEGG Orthology (KO) [BR:
hfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfl03400
]
PUV54_05175 (addA)
Enzymes [BR:
hfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUV54_05175 (addA)
DNA repair and recombination proteins [BR:
hfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PUV54_05175 (addA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DUF3638
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
WDI32585
UniProt:
A0AAE9ZF28
LinkDB
All DBs
Position
complement(1070545..1074036)
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AA seq
1163 aa
AA seq
DB search
MTPFEQTVANQRIAATPSRSSFVMANAGSGKTRVLTNRVARLLLDGVDPEKILCITFTKA
AAAEMADRLFSVLGDWALATDAQLMVALEELEGARNERAPDDLAKARRLFARALETPGGL
KIQTIHSFCESVLRRFPLEAGAPPGFTVLEDADGFALINAALDRVARDAGDDPVLAAAFS
QLSGERNEDQLRGLLIGAAAKGAIFEQASDCETQIAQLAQALKVNPPFDAARVKDQFLSA
LDVQDLKRAHDGLAAEGKKPQDAAKRLAPYFSTEENSEKWLVLENFLLTSAGTPYKQLAT
NATDKHDPWVKPYLQDLLTGFDDTVDNLKALKIFQDTAAHWRLTAALREQYNATKSFRAV
LDFDDLILRTRALFMRAESAWVMYKLDFGIEHILLDEAQDTSPEQWSVIESLFEEFFSGA
GAREVSRSFFAVGDLKQSIYSFQGADVDLFKQKEQELGEKLAQVTDYKSVPLNLSFRTTA
PVLSFVDSAFADKQAAEGLGDVVPVHGVKRDGEAGVVELWPLTPYPEKPEVNPWDAPVDA
PVSNHPVRVLCDRVASTIKDWIDKSELLESQGRAVRPGDILILVQSRGKLFTEIISRLSA
LGVPVAGPDRLKLNEDPAVEDLISYARFALCASDDLSLAEVLKSPLYGFDDDTDLFPLAY
DREKHETLWKSLRRRANEHLRWRSAVDEISAASAIGKFEGPLAFLNHVIDAGETSGRKRF
YQRLGKASSDAVDELLRQALDFENSNPRSLRAFVDWFDRSAADIKREMERENDSVRVMTA
HGAKGLEAEIVFLLDAHRDINTRNIGPLISLKDCEGRGLPPEAALLVNSKSDDIDLTERA
RENLKCKDYEEYRRLFYVAATRAKDRLYICGVESGKKSDPHKKPVNQKTWHALAEDAFGR
LVNVSTDSSPFWEEGGGVVRRISCDQSAPVKKEPLLVETPAISTPSWLFQKAGKETLAQR
LTPSKLGGEEEIHQYLEEADGSYSPLRGHDKYFRGRVLHRLLELLPEVAEQERLNVADRL
LGWLADSVDLGERERWRDEVLKVLHDPSFAKVFAPGSMAEVPIAGTLGAGDTALKISGQI
DRLVVSESQVFVVDYKTNRPPPQVAAEIDPSYVAQMAAYRALVQEIYSGHEIICGLLWTY
DARLMMVPKEMLDHAAVRAGIAG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgacaccctttgagcaaacagtcgctaatcagcgtattgcggcgactccatcgcgttcg
tctttcgtcatggctaacgccggatcaggcaaaacgcgcgtgcttacaaatcgtgtcgcc
agattgcttcttgatggcgtcgatcctgaaaaaattttgtgcattacattcaccaaagcg
gccgcggccgagatggctgaccggttgttctctgtgcttggtgattgggctcttgccacg
gatgcgcagttgatggttgctctggaagagcttgagggcgccaggaacgagcgcgcgcca
gatgatctcgccaaggcgcgccggctttttgcacgagcgcttgaaacgccgggcggcctt
aaaattcagaccatccattcgttttgcgaaagcgtgctgcgacgttttcctttggaagcc
ggcgcgccgccgggctttacggtgctggaggatgctgacggcttcgcgcttataaatgca
gcgctggaccgcgttgctcgtgatgctggagatgatcctgtgctcgctgcagctttcagt
caactttctggtgagcgaaatgaagatcagctacgtggattgctcatcggggctgcagcc
aagggcgctatattcgagcaagccagtgattgtgaaacgcaaatcgcgcaattggcgcaa
gcgttaaaggttaatcctcctttcgacgccgcccgagtaaaggatcaatttctttctgct
cttgatgttcaagatttgaaacgcgctcatgatggtcttgccgctgaaggaaagaagcca
caggacgccgcaaaaagattggcgccgtatttttcaaccgaggagaattctgaaaagtgg
cttgttcttgaaaattttttattgaccagcgccggtacgccttacaagcaacttgcgact
aatgcgacagataagcatgatccgtgggttaagccatacctgcaagatttgctgacagga
tttgatgatactgttgataatctgaaggcgctgaaaatctttcaggataccgccgctcat
tggcggctgaccgctgcgctccgcgagcagtataatgctacaaaatctttccgagcggtg
cttgattttgacgatctcatcttgcgcacacgcgcgttattcatgcgtgctgaaagtgca
tgggtgatgtacaagctcgattttggcatcgagcatattctgctggacgaagcgcaggat
actagccctgaacaatggtcggtaatcgaaagcctgttcgaagaattttttagcggtgct
ggcgcccgcgaggtttcgcgaagctttttcgccgttggcgatctcaagcaatctatttat
tctttccaaggtgctgatgtcgacttgttcaagcaaaaggaacaggaacttggtgagaaa
ctggcgcaggttaccgattataaaagcgtgccgttaaatctttcgtttcgcacgactgcg
ccggttctttcctttgttgattctgcttttgccgacaagcaagcggcggaagggttgggc
gatgttgttccggttcatggagtcaagcgggatggcgaagcaggagtggtggagctgtgg
ccgctgacgccgtatcctgagaaaccggaagtcaatccatgggatgcgccagttgacgcc
ccggtcagtaatcacccggtgcgggtgctttgcgatcgtgtcgccagcacaatcaaagac
tggatcgataagagtgagttgcttgagtctcaagggcgcgccgtcaggcctggagacatc
ctcatacttgttcagagccgcggaaagctgttcacagaaattatttcacggctttcggca
ttaggcgtcccagtggcggggcctgatcggctgaagttgaatgaagatccggcggttgaa
gacctgatctcctacgcacgctttgcattgtgtgcgtcagatgacttatctcttgcggag
gttctgaaaagcccgctttacggctttgacgacgatactgatcttttccctctggcttac
gatcgcgaaaagcatgagacattgtggaaatcgttgcgccgccgcgcaaatgagcacctt
cgatggcggtcagccgttgatgagataagcgccgctagcgccattgggaagtttgagggg
cctttggcgtttctcaatcacgtcatagatgcaggtgagacatcaggacgaaaacgtttc
tatcagcggctcggaaaagcatcgagtgatgcagtagacgaacttttgcgacaggcgctg
gattttgagaattcgaatccacgcagcttgcgcgcctttgtggattggttcgaccgtagc
gctgcggacatcaaacgcgagatggaaagagaaaatgattccgtgcgtgtcatgaccgcg
catggggcgaaaggccttgaagcggagatcgtttttcttctcgatgcacatcgcgatata
aacacgcgaaatattggcccgttgatttcgctaaaggattgcgaaggacgcggactgcca
cctgaggcggcgttattggtcaactcaaagtctgatgacattgatcttaccgaaagagcg
cgagaaaacctgaaatgcaaagattatgaggagtatcgacggcttttttatgtggcggcg
acgcgcgctaaagaccggctttatatttgcggtgtcgagagcggtaaaaaaagcgatccc
cataagaagccggtcaatcaaaaaacctggcacgctctggctgaagatgcattcggccgc
ctggtcaatgtatcaaccgactcaagcccgttctgggaagaggggggtggtgttgttcgc
aggataagctgcgaccagtcggcgcccgtcaagaaagaaccgctactagtagagacgcca
gcaatttcgacgccgtcatggttgtttcaaaaagcaggaaaagaaacgctcgcgcaaaga
ttgactccttcgaagctcggtggagaggaagagatacatcaatatttggaggaggctgac
ggttcttattcacctttgcgcggacacgacaagtattttcgtgggagggttttgcacaga
ttgttagagttgttgccagaggtagccgagcaggaacgcttaaacgtagcggatcggctg
cttggctggcttgcagactctgtcgacctgggtgagcgcgaaaggtggcgcgatgaagtt
ttaaaggtgttgcatgacccgtcattcgcgaaggtttttgcgccggggtccatggcggag
gttccgatagccgggacgctcggtgctggcgataccgctttaaaaatcagtggacagatt
gatcgtctcgtcgtttctgaatcacaggtttttgtggttgattataaaaccaaccggcct
cctccgcaggtggccgctgagatcgatccatcctatgttgcgcaaatggctgcctatcgc
gcgttggttcaggaaatctattccggccatgagatcatctgtggccttttatggacttat
gatgcccggttgatgatggttccgaaagaaatgcttgatcacgcggcggtgcgtgccgga
atagcgggttga
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integrated database retrieval system
