Hyphococcus flavus: PUV54_06065
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Entry
PUV54_06065 CDS
T08821
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hfl
Hyphococcus flavus
Pathway
hfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUV54_06065 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hfl03021
]
PUV54_06065 (rho)
03019 Messenger RNA biogenesis [BR:
hfl03019
]
PUV54_06065 (rho)
Transcription machinery [BR:
hfl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PUV54_06065 (rho)
Messenger RNA biogenesis [BR:
hfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PUV54_06065 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
Mor
Motif
Other DBs
NCBI-ProteinID:
WDI33239
UniProt:
A0AAF0CH63
LinkDB
All DBs
Position
1261477..1262733
Genome browser
AA seq
418 aa
AA seq
DB search
MTLDELKEKTPADLLAFAEELEVENASTMRKQDMLFAILKELADHDVEIHGGGVLEVLPD
GFGFLRSPDANYLAGPDDIYVSPNQIRRFALRTGDTVKGEIRSPKDGERYFALLKVHTIN
FEDPEKARHKVHFDNLTPLYPEERLKMEIGDEKTKDLTARVIDLVAPLGKGQRGLITAPP
RTGKTVILQNIAHSIATNHPEAYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAARHV
AVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIETGSKMDEVIFEEFKGTGNSELILDRKVADKRVYPAIDI
AKSGTRKEDLITDKGAMQKIFVLRRILAPMGVNDAIEFLLDKLKQTKTNQDFFDSMNT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgacgagctgaaggaaaaaaccccggccgacctgctcgctttcgccgaagag
cttgaagtcgaaaacgcatcgactatgcgcaagcaggacatgttgtttgcgatcctgaaa
gagcttgcggatcacgacgtggaaatccacgggggcggcgttttggaagtgttgccagac
gggttcgggttcttgcgctcacctgacgcaaactatctcgccgggccagacgatatttac
gtctcgcccaaccagatccgccgttttgcgcttcggacgggcgatacagtcaaaggggaa
atccgcagcccgaaagacggcgagcgctatttcgccctgttaaaagtccacaccattaat
tttgaagaccctgaaaaagcgcgccataaggtgcactttgataatttgacgccgctctat
ccggaagagcggcttaaaatggaaatcggcgacgaaaaaacaaaggacctgactgcacgg
gtgatcgatctggtggcgccactcggcaagggtcagcgcggtttgatcaccgcgccgccg
cgcaccggtaaaaccgtcattcttcagaatattgcgcattcgatcgcgacgaaccatccg
gaagcctatctgatcgtccttctcatcgacgaacgtccggaagaggttaccgacatgcag
cgttcggtgaagggcgaggttgtgtcctccacctttgacgagccggcggctcgtcacgtc
gcagttgctgaaatggtcattgagaaggctaaacgtctggtcgagcatggccgtgacgtc
gtcatcctgctcgactcgatcacgcgtctcggccgcgcctacaacacggtcgtgccgtct
tcgggcaaggtcctcacgggcggtgtggacgccaacgcgctgcagcgaccaaaacgtttc
tttggcgcggcgcgtaatattgaggaaggcggatcgctgaccattattgcgacagccctg
atcgagaccggctcgaaaatggacgaggtgatcttcgaggaattcaaaggcacaggtaac
tccgaactcattctcgaccgcaaagtcgccgacaagcgggtctatcctgcaatcgatatc
gccaagtccggcactcgcaaggaagatctcatcaccgacaagggcgccatgcagaaaatt
ttcgttctgcgccgtatcctcgcgcccatgggcgtcaacgacgccatcgagttcctgctt
gataaactgaagcagacaaaaaccaatcaggatttcttcgattcgatgaatacttaa
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