Hyphococcus flavus: PUV54_06260
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Entry
PUV54_06260 CDS
T08821
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hfl
Hyphococcus flavus
Pathway
hfl03030
DNA replication
hfl03430
Mismatch repair
hfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PUV54_06260 (dnaQ)
03430 Mismatch repair
PUV54_06260 (dnaQ)
03440 Homologous recombination
PUV54_06260 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfl03032
]
PUV54_06260 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hfl03400
]
PUV54_06260 (dnaQ)
Enzymes [BR:
hfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PUV54_06260 (dnaQ)
DNA replication proteins [BR:
hfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PUV54_06260 (dnaQ)
DNA repair and recombination proteins [BR:
hfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PUV54_06260 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
WDI32799
UniProt:
A0AAE9ZD85
LinkDB
All DBs
Position
1301889..1302611
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AA seq
240 aa
AA seq
DB search
MRQIVFDLETTGFKFSEGHRIVEIGALEMINGAVTGRNFHTYVNPERDMPEGAYKVHGLS
AAFLSDKPIFTDEAVASAFLAFVGDAELIAHNGIGFDLPFLNAELEAASHKRLDNEIIDT
LHLARRKFPGSPASLDALCARFGIDTSTRERDGHGALLDSKLLAKVYIELTGGAQAGLDF
KRDNSSGINSGKTNTSQRTARPRPQRLAPLITDEEKAAHQAFIEELGEDSLWLRRATAAR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagatcgtattcgacctggaaacgacaggttttaaattctctgagggacaccgg
atcgtcgaaatcggcgcccttgagatgatcaacggcgcggtaacggggcgcaactttcac
acctacgtcaatcctgagcgcgatatgcctgagggggcttacaaagtgcacgggctttca
gccgcttttttgagcgacaagccgatttttacggatgaggcagtagcgtcagccttttta
gcgtttgtcggcgacgcggaattgatagcccataacggcatcggctttgatttgcctttt
ttgaacgcggaactcgaagccgcgtcgcataagcgtctcgacaatgagatcattgacacg
cttcatctggcgcggcgcaaatttccaggctcgccagcgagtctcgatgcactgtgcgca
cggttcggcatcgacacgtcaacgcgcgagcgtgacgggcacggcgcattgctggactca
aagttgctggcgaaagtgtacatcgagttgacgggcggcgcgcaggccggcctcgatttt
aaacgagacaattccagcggaatcaattctggtaaaactaacacgagtcaaaggactgcc
cgcccccgccctcagcgattggcgccgctgattacagacgaggaaaaagccgcgcatcag
gcttttatagaggaactaggcgaagacagtctttggcttcggcgcgctaccgccgcgcgt
tag
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integrated database retrieval system
