Hyphococcus flavus: PUV54_11000
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Entry
PUV54_11000 CDS
T08821
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hfl
Hyphococcus flavus
Brite
KEGG Orthology (KO) [BR:
hfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hfl03016
]
PUV54_11000 (thpR)
Enzymes [BR:
hfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PUV54_11000 (thpR)
Transfer RNA biogenesis [BR:
hfl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PUV54_11000 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
WDI30485
UniProt:
A0AAE9ZBU4
LinkDB
All DBs
Position
2307033..2307575
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AA seq
180 aa
AA seq
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MHRLFVAIEIPEIVADALTVLQSGVDGARWRPTENFHLTLAFIGEADRHGFSNAVDALST
IDAPAFDLRLKGVGFFGDKQPRSLWAGIEPCPALDHLQAKTEQALRRAGCNIEKRKFKPH
VTLAYLRGVSQDTAMVYASQHGLFSCGPFPVEAFHLYSSQLGGGASVYNIEASYALSSST
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtctatttgtcgccattgaaataccggaaatcgtcgctgacgcgctaactgtt
ctgcagtccggcgttgatggagcgcgctggcgtccaacagagaattttcatctgacgctc
gctttcattggcgaggccgaccggcacgggttttcgaatgctgttgacgccctttccacc
attgacgcgcctgccttcgatttacgcctgaaaggcgttggtttctttggagataagcaa
ccacgaagtctatgggcgggcatcgagccatgcccggcgctcgatcacttacaggctaaa
acagagcaggcgttgcgccgggccggttgtaatatcgaaaaacggaagtttaagccgcat
gtgacgctcgcttatttgcgcggcgtcagtcaggacacggccatggtttatgcctctcaa
cacggacttttttcttgcggccctttcccggttgaggcttttcatctttattcatcgcaa
ttgggcggcggcgccagcgtatataatattgaagcgagctacgcgctttcatcttcaaca
tga
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