Hyphococcus formosus: ABFZ83_02930
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Entry
ABFZ83_02930 CDS
T10776
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hfo Hyphococcus formosus
Pathway
hfo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABFZ83_02930 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfo03400
]
ABFZ83_02930 (uvrB)
DNA repair and recombination proteins [BR:
hfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABFZ83_02930 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABFZ83_02930 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
EspA
AAA_22
AAA_5
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
XMO97488
LinkDB
All DBs
Position
complement(636769..639135)
Genome browser
AA seq
788 aa
AA seq
DB search
MFAFMPAPKNKPTSQPTTPKSAIANHGFAEAVASYHDRLAPPLAAWTPHRPERPEKRGLS
KPLRVVSDYEPAGDQVTAIPELTEGIRQGEWDQVLLGATGTGKTFTMAKVIEATQRPALI
LAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESTINEQIDRM
RHAATRAILERDDVIIVASVSCIYGIGSVETYTAMTFTLKVGQMLERKKLLADLVALQYK
RNDNAFARGCFRARGDTIEIFPAHYEDRAWRVSMFGDEIETITEFDPLTGKKTGDLEEVT
LYANSHYVTPRPTLNQAITGIKKELNEVIPVMREEGRLLEAQRLEQRVQFDLEMMAATGA
CAGIENYSRYLTGRLPGEPPPTLFEYLPENALVFTDESHVTVSQIGAMFRGDFARKKTLA
EYGFRLPSCLDNRPLKFEEWEKMRPQTIHVSATPGKWEMEQTGGVFTEQVIRPTGLIDPV
VEVRPVTGEKANQVDDVIAECQTIAKKGGRVLVTTLTKRMAEDLTEYMHEQGIRVRYMHS
DIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECQLVAILDADKEGFLRSETSLIQT
IGRAARNVYGRVILYADKITGSMERAMSETDRRREKQIAHNKAHGITPASTKAKIAEIAS
SDDEGAKAAMGQTFVGDRGFQAISNRAGFAEDEADFEGAPGHNLKAHLDHLTKEMHEAAS
NLEFETAARLRDEIKRLQEVELAIADDPLARQSTIEARVEATSDGRIKKSEGTVSNVRSK
PRSRKKKR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcatttatgccagcgccgaaaaacaaaccgaccagtcagcccaccacgccaaaa
tccgcgattgccaatcacggatttgcggaagccgtggcgagctatcatgaccgcctcgcg
ccgccattggcagcatggacaccacaccgccctgagcgcccggaaaaaaggggcttgtcg
aaaccattgcgggtagtctctgactatgagcctgcgggcgatcaggtaaccgctattccc
gaattgaccgaagggatccggcagggcgaatgggaccaagtgctattaggcgcgaccggc
accggtaaaaccttcaccatggccaaggtaatcgaggcaacccagcgcccggcgctgatc
ctcgcgccgaacaagacgcttgctgcgcagctgtatggcgaattcaaagccttcttcccg
gacaatgcggtcgagtatttcgtgtcctactacgactattaccagccggaagcctatgtt
ccgcgcacagacacctatatcgaaaaagagagcacgatcaacgaacagattgaccggatg
cgtcacgccgcaacacgcgcaattcttgagcgggatgatgtcatcatcgtagcttccgta
tcgtgcatttacggtatcggctcggttgaaacatatacggcgatgaccttcacgctcaaa
gttggccaaatgctcgagcggaaaaagctgttggccgatctcgttgcgctacaatacaaa
cgcaatgacaatgccttcgcgagggggtgcttccgtgcgcgcggcgacacgattgagatt
ttcccggcacactatgaagaccgcgcctggcgcgtttcaatgttcggcgatgagatcgaa
acgatcaccgaatttgatccattgaccggaaagaaaacgggcgatctcgaagaggtcacc
ctctacgcaaactcacactatgtaacgccgcgaccgacactcaatcaggccatcaccggg
atcaaaaaagaactaaacgaagtcattccggtcatgcgtgaagaaggccgattgctagaa
gcccaacggcttgaacaaagggtgcagttcgatcttgaaatgatggccgccaccggtgcc
tgcgcggggatcgaaaactattcgcgctatttgacgggccgcctgcctggcgaaccgccg
cccaccctgttcgagtatctacccgaaaacgcactcgtttttacagacgaaagccatgtc
accgtttctcagatcggcgcaatgtttcgcggtgacttcgcgcgcaaaaagacactggcc
gagtatggtttccggctgccatcatgcctcgataaccggccactgaaattcgaagaatgg
gaaaagatgcgcccgcagaccatacacgtatccgcaacgccgggtaagtgggaaatggaa
caaaccggcggcgtattcaccgaacaggtcatcaggccaactggcctgatcgacccggtt
gtcgaagtgcgtccggttactggcgaaaaagccaatcaggtcgatgacgtgattgccgag
tgccagacaatcgccaaaaagggcggccgggttttggtaacgaccttgaccaagcgcatg
gccgaagacctcaccgaatatatgcacgaacaaggtattcgcgtgcgctatatgcattca
gatatcgacacacttgagcggatagaaattattcgcgatctgcggcttggggcgttcgat
gtattagtcggcatcaaccttttgcgggaggggttggatatccccgaatgtcaattggtt
gctattttggatgccgataaggaaggttttttgcgttcagaaacctcgttgattcagacc
attggccgggctgcgcgaaatgtctacggacgcgtcattctttacgccgacaaaattacg
ggctctatggaacgggcgatgagcgaaacggatcgccgccgtgagaagcaaattgcccac
aacaaagcgcatggcattacccccgcgagcacaaaggcaaaaatcgccgaaattgcctca
agtgacgacgagggcgcaaaagccgcaatgggccagacatttgttggcgatagaggtttt
caagcaatttccaaccgcgctggctttgcggaggatgaggccgacttcgaaggcgcaccg
ggacataatctcaaggcgcatcttgatcacctcaccaaggaaatgcacgaagcggcatcc
aatcttgagtttgaaacggcggcgcgtctgcgcgatgaaatcaagcgccttcaagaggtc
gaattggctatcgctgatgatcccctcgcccggcagtctacgatcgaagcacgggttgaa
gcgacttctgatggccgtatcaaaaaatcagaaggcaccgttagcaacgtacgcagcaag
ccgcgatcgcggaagaaaaagcggtaa
DBGET
integrated database retrieval system
