KEGG   Hyphococcus formosus: ABFZ83_06110
Entry
ABFZ83_06110      CDS       T10776                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hfo  Hyphococcus formosus
Brite
KEGG Orthology (KO) [BR:hfo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ABFZ83_06110 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hfo03019]
    ABFZ83_06110 (rnc)
   03009 Ribosome biogenesis [BR:hfo03009]
    ABFZ83_06110 (rnc)
   03036 Chromosome and associated proteins [BR:hfo03036]
    ABFZ83_06110 (rnc)
Enzymes [BR:hfo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ABFZ83_06110 (rnc)
Messenger RNA biogenesis [BR:hfo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ABFZ83_06110 (rnc)
Ribosome biogenesis [BR:hfo03009]
 Eukaryotic type
  90S particles
   RNase
    ABFZ83_06110 (rnc)
 Prokaryotic type
  rRNA processing factors
   ABFZ83_06110 (rnc)
Chromosome and associated proteins [BR:hfo03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ABFZ83_06110 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: XMO98099
LinkDB
Position
complement(1316699..1317406)
AA seq 235 aa
MSKHNFAALEKKFGHKFSDPTLLKRALTHSSLSGGDSSVRDLERLEFLGDRVLGLLTAEE
LWRKYPHFNEGDLAPRLNALVRKETCAKAALFFGVDKFILMSEWEDSAGGRRKTAILGDV
MEALLGALYVDAGLEAARKVFDLFWTENIEDLSRLHKDPKTALQEWSQHKKLGTPSYNVL
DAEGPAHAPAFTIEVRIKGAKPATGEGRSKREAQMAAARAFLEREGVWNEKRKSK
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcaaacataattttgccgcgctggaaaaaaaattcggacacaaattttctgatccg
actttactaaaacgcgcgcttacccattccagcctttctggcggcgatagttctgtccgt
gatttggagcgccttgagtttcttggtgatcgggtgctcggcctgctgacggccgaagag
ctgtggcgcaaatatccgcatttcaatgagggcgatctcgcgccgcgcctcaatgcgctg
gtccgcaaagaaacctgcgccaaggccgcgcttttctttggcgtggataaatttattctg
atgtcggaatgggaggacagcgctggcgggcggcggaaaactgcgatcctcggcgatgtc
atggaggcgcttttaggggcgctttatgtcgatgcagggcttgaggccgcgcgcaaggtt
tttgacctgttctggacagagaatatcgaagatctttcgcgccttcacaaagacccgaaa
actgcgcttcaggaatggagccagcacaaaaaactcggcaccccgagttataatgtcctt
gatgccgaaggcccggcccatgcgcccgccttcaccattgaggtccgcataaagggtgca
aagccagccaccggagaagggcgttcgaaacgcgaagcccaaatggcggcggcgcgcgct
ttccttgaaagggaaggcgtgtggaatgagaaaagaaaatcgaaataa

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