Hyphococcus formosus: ABFZ83_09565
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Entry
ABFZ83_09565 CDS
T10776
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hfo Hyphococcus formosus
Pathway
hfo00300
Lysine biosynthesis
hfo00470
D-Amino acid metabolism
hfo01100
Metabolic pathways
hfo01110
Biosynthesis of secondary metabolites
hfo01120
Microbial metabolism in diverse environments
hfo01230
Biosynthesis of amino acids
Module
hfo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hfo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABFZ83_09565 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABFZ83_09565 (dapF)
Enzymes [BR:
hfo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABFZ83_09565 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XMO95885
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All DBs
Position
2091070..2091924
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AA seq
284 aa
AA seq
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MSSLSGHPYLIMNGLGNRFVIIDLRDNPMVIDNDLAKKIADPKTGPGCDQVITLEHRKGI
DGVFMGIWNADGDEVGACGNASRCVGWLLMEEQDESETRFETASGALHATKVGDKRIAVD
MGEPKFHWRDIPLAEQMDDTRFVDIKLGPIDNPVLWGPSTVNVGNPHCIFFVDDVNAHAL
EKFGPMIEHHPLFPERANVSIAQVTSKHAIRLRVWERGAGITKACGTAACAALVCAHRRR
LTGRKAVITLDGGDLAVEWREDDNRIIMTGPISLDEKGEFGTDF
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctctatccggacacccctatttgatcatgaacggtctaggcaatcggtttgtc
atcatcgaccttcgcgataaccccatggttattgataatgatctggccaaaaaaatcgct
gatccgaaaaccggtcccggttgtgatcaggtgatcactctcgaacaccgtaaagggatc
gacggtgtgttcatggggatttggaatgccgatggtgatgaggttggtgcctgcggcaat
gcctcgcgctgtgttggctggctcttgatggaagagcaggacgaaagcgaaacccgattc
gaaacggcgagcggcgcgctccatgcgacaaaggttggcgacaaacgcattgcggtcgat
atgggcgagccgaaattccattggcgcgatattccgctcgccgagcaaatggacgacacc
cgctttgttgatatcaaattaggcccgatcgacaatccggtcctttggggcccttcgacg
gtcaatgtcggtaacccgcattgcatctttttcgttgacgatgtgaacgctcatgcgctc
gaaaaattcggaccgatgattgagcaccatccgctcttccctgaacgcgcgaatgtttcc
atcgcccaagtaaccagcaaacacgcgatccgccttcgcgtgtgggaacgcggtgcgggc
atcaccaaagcctgcggcaccgccgcttgtgccgcactggtttgcgcccaccggcggcga
ttaaccggacgcaaggctgttatcacgctggatggcggcgatcttgcggttgaatggcgc
gaagacgataatcgcatcatcatgaccgggccgatatcacttgacgaaaaaggcgaattc
gggaccgacttctaa
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