Hyphococcus formosus: ABFZ83_11210
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Entry
ABFZ83_11210 CDS
T10776
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hfo Hyphococcus formosus
Brite
KEGG Orthology (KO) [BR:
hfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfo03400
]
ABFZ83_11210 (addA)
Enzymes [BR:
hfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABFZ83_11210 (addA)
DNA repair and recombination proteins [BR:
hfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ABFZ83_11210 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_22
AAA_16
DEAD
AAA_12
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XMO96198
LinkDB
All DBs
Position
complement(2440008..2443490)
Genome browser
AA seq
1160 aa
AA seq
DB search
MTPLQETTDNQRHAAHPARSVFVMANAGSGKTRVLTNRVARLLLSGAEPEKILCITFTKA
AAAEMAERLFSVLGEWALASDNELIEALKEIEGDDAEEKTPDQLAQARRLFARALETPGG
LKIQTIHSFCESVLRRFPIEAGAPPGFTVIEDAQALGMRNSALDALAIRADDDPQLRAAF
TRLSATRKEKSLRDLLLSGLKPTLEDIDVDAALAALGRELLIDPKLSEDQIKADFIGRLS
KDDLQCAHNGLAADGKQPQDAAKRLAPYFSASGADEKWDILCAFLLTADRSKLRSRIATA
ATDKVDPWVGPFLKQLAQDFEDTLRQLKKLAFFQDTAAHFRLCKALFDIYAAAKSDRAAL
DFDDLIVRTRQLFSRVNSAWIMFKLDYGVDHILIDEAQDTSPNQWAVVESLFEDYFSGAG
ARLDQRSFFAVGDMKQSIYSFQGADVGLFQAKEIDLGRRLEAVTDYKNLKLKMSFRTTEP
VLKFVDEVFSDKEAAEGLGEFPIPEHGVCREGQAGLVELWPLTPRPESETVNVWDAPVDA
PAGDHPVRVLCEKIASTIKGWLDRDEILQSSGKPIRPGDIMILVQSRSTLFREVIQRLSA
QGVPVAGPDRLVLLEDPVIEDLLSYARFALNQSDDLSLAEILKSPLFGFDDDNDLFPLAY
DREYSLWAELRKRASENPKWKTAFDEISLARDIARQQGPFAFFNHILETGTPSGRQRFYR
RLGEVSSDAMDELLRQAIDFENASPRSLREFLSWFEKSATDIKREMDRQNDAVRVMTVHG
AKGLEADVVFLLDAHREVRSANVGPLFAPPSGTNLPDGLTLLAGSKTNDVDLTDRARQEK
LQQDYEEYRRLFYVAATRARDRLYICGVQQGNNKNPNDKETGVKSWHALSIDAFERLGKR
AKIGAEGFWPNDDSPVMRISCPQTAKVKPSEKAIETTSALAAPDWMFEKAPAEGRGQRLT
PSKLLGEEDLEAQAPAYSPVLGESGGDKYFRGRIIHRLLELLPEVAAEVRSEAADRLLAR
LAQTVSPDERDLWRDEVLTVLTDEKFSAVFAPGSRAEVPIVGRPANAPADLRINGQIDRL
VITEKQVLVVDYKTNRPPPHDVVKVDPTYVAQMAAYRALLQEIYPEHEIICALLWTFDAR
LMELPGEILDHAFARIKSMG
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcttcaggaaacaactgataaccaacgccatgcggcgcatcccgcgcgatca
gtattcgtgatggccaatgccggatcaggaaaaacacgggtactgacaaaccgcgttgcc
cggctcttgctgtctggcgctgagccggaaaagatcctgtgtattacattcaccaaagcg
gcggccgctgagatggcggagcggcttttctcggtgcttggtgaatgggcgttggcgagc
gataatgagttgatcgaagcgctaaaggaaatcgaaggcgatgatgccgaagaaaagacg
cccgatcaattggcccaagcgcggcggctatttgcgagagcgctagaaacaccgggcgga
ttgaaaatccagacgatccattctttttgtgagagcgttttgcggcgctttccgattgaa
gccggggctccaccggggttcaccgttatcgaggatgcgcaagccttgggcatgcggaac
agcgcccttgatgcgctggcgatccgggctgacgacgatccgcaattgcgcgcggcattt
acgcgcctctcggccacacgaaaagaaaagtcgctgcgtgatctgttgttgtcggggcta
aagccaacgcttgaggatattgacgtcgatgccgcgctggcggccttggggcgggagttg
ctgatcgatccaaagctaagcgaggatcagatcaaggcagatttcatagggcgtttatca
aaggatgaccttcaatgcgcgcataacggtctcgcggcggatggaaaacagccacaagac
gcagccaaaagactcgccccttatttttcggcgtcgggcgcggacgagaaatgggacatt
ctttgcgcttttcttttgactgcggatcgcagcaaattgcgcagtcgaattgcgacagcg
gcgaccgataaggtcgatccatgggttgggccatttctgaaacagttggcgcaagatttc
gaagatacattgcgccagttaaagaagcttgcgttttttcaggatacagccgcccatttc
cgtctttgtaaggcgctttttgacatatacgctgccgcgaaatccgatcgagcggcgctt
gatttcgatgatttgattgttcgtacacgacagcttttcagccgcgttaattccgcttgg
atcatgttcaagctcgattatggcgtcgatcatatcttgatcgacgaagcacaagatacc
agccccaaccaatgggctgtggttgaaagcctgtttgaggattattttagcggcgctggg
gcgcggcttgatcagcgcagtttcttcgctgttggtgatatgaaacagtcgatctattca
tttcaaggggcggatgtcgggctgtttcaggcaaaagaaattgatcttggccgacgtctt
gaggcggtaaccgactataaaaatctcaagctcaaaatgtccttccgaacgacagagccg
gttctcaaatttgtcgatgaagttttttcagacaaggaagcggctgaagggcttggtgaa
tttccgatcccggaacatggcgtttgccgcgaagggcaggcggggctggttgagctgtgg
ccgttaacgccgcgccccgagagtgagacagtcaatgtctgggatgcccccgttgatgca
ccggcgggtgatcatccggtcagggtgctttgcgagaaaattgcttcgaccataaaaggc
tggcttgatcgcgatgagattttacaatcgagcggcaagcccatcaggcccggcgatatc
atgatattggtgcaaagccggagcacgcttttccgcgaagtcattcaacgcctatcggcc
cagggagtgccggtcgcggggcccgaccgtttggtattgctcgaagacccggtgattgag
gatctgttgtcctatgcgcggttcgcactcaatcaatcggatgatttatcgctggccgaa
attttaaaaagcccgcttttcggttttgatgacgacaatgatctgttcccgcttgcctat
gacagggaatatagtttgtgggcagagttacgcaaacgagcgagcgaaaatccgaaatgg
aaaacggctttcgatgaaatttcccttgcgcgcgatatcgcaaggcagcaaggcccattc
gcctttttcaatcatattctggaaaccggtacgccttcggggcggcagcgattttatcgc
cggttgggagaggtgagcagtgatgccatggatgaattgctgcgccaggccatcgatttt
gaaaacgcttctccccgctctttgcgcgaatttttgtcatggtttgaaaaatcagcgacg
gatatcaaacgcgagatggaccgccagaatgatgcagttcgtgtcatgacggtacatggc
gcaaaggggttagaggccgatgttgtcttcttactcgatgcgcatcgcgaggttcgatca
gcaaatgtcggtccattatttgcgcccccaagcggcacaaacttgcccgatggattaacg
cttctcgcggggtcaaagacgaatgatgtcgacctgaccgaccgcgcccgccaagagaaa
ttgcaacaagactatgaagaatatcgtcgcctgttttatgtagcggcaacccgcgcccgt
gatcggctctatatttgcggcgttcagcaaggcaacaacaaaaatccaaacgataaggaa
acgggcgttaaatcctggcatgcgttatcgattgacgcgtttgagcggttgggcaaacgg
gcaaaaattggcgcggaagggttttggccgaatgacgacagccccgttatgcggattagc
tgtccacaaacggcaaaggtaaagccttcggaaaaagcgatagagacgacaagtgcactc
gccgcgcccgattggatgtttgaaaaagcccccgccgaagggcgcggacagcgattgacg
ccatcgaagctattgggtgaagaggatttagaagcgcaagcaccagcctattcaccagtg
ctcggcgaaagcggcggcgacaaatatttccgtggccggattatacaccgcctccttgag
ctattgccggaggttgcagcagaggtgcgttcagaagcggcggaccggctattggcgcgc
cttgcgcagactgtaagtccggatgagcgggatttatggcgcgacgaagttttgacggtt
ttgaccgatgaaaaattttctgccgtattcgcgccgggctcgcgcgccgaggtgccgatt
gtcggacgccctgccaatgcgcctgcggatttgcggatcaatggtcaaattgaccgattg
gtgataaccgaaaaacaagtgctggttgtggattataaaaccaaccgcccgccaccccat
gatgtggtaaaggttgatcccacttatgtggcgcagatggcggcctatcgcgccttgcta
caggaaatctatcctgaacatgagatcatctgtgcattgctatggacgtttgatgcgcga
ttgatggagctgccaggggaaattctcgatcacgccttcgcgcgcataaagtctatgggt
tga
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