Hyphococcus formosus: ABFZ83_12405
Help
Entry
ABFZ83_12405 CDS
T10776
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hfo Hyphococcus formosus
Pathway
hfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABFZ83_12405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfo03400
]
ABFZ83_12405
Enzymes [BR:
hfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABFZ83_12405
DNA repair and recombination proteins [BR:
hfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABFZ83_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
WHD_DprA
Zn_ribbon_PriA
AAA_22
Glyco_tranf_2_3
ADDB_N
DUF3388
Motif
Other DBs
NCBI-ProteinID:
XMO96426
LinkDB
All DBs
Position
2675650..2677902
Genome browser
AA seq
750 aa
AA seq
DB search
MNKMQQLLYPELASSATAPSGDADAGPRVSVLFPLPLPKAYDYLCDSEELPPVGSFVSAP
FGPREVTGVVWPANKGEAKKKNAKVQNLKTISRVFDAPPLASDLVDFIDWAADYTMYPKG
AILRMVMRVKDAFDGPRMQTAFVATGEKPARITPKREAVLAAAGAEPQTAAQLAEASGMS
EAVVRGLVSAGSLAKVEVDPDPPFDAPDLMRAGPTLSGDQQYAADFVAEIIARDEHKAIL
VDGVTGSGKTEVYFEAVAAALRKDPDAQALILLPEIALTLPFLERVEARFGAAPAPWHSD
LTGAQRRRTWRRVAEGQARLVVGARSALFLPFPKLQLIVVDEEHDSAYKQEEGVIYHARD
LAVARGARAGFPVLLASATPSLETVVNVDEGRYEAVGLAGRFNDAQMPDISLIDMREDAP
DAGKWLSPRLVDEINANLSAGEQSLLFLNRRGYAPLTLCRRCGHKMTAPGSDTMLVEHRF
ENRLVCHHTGFSMPKPSVCPVCKAVDSLAACGPGVERVAEEAKERWPDARIEVLSSDTAP
GPRTMRAVLDAMKAGEIDILIATQVAAKGHHFPNLTLVGVVDADLGLAGGDLRAAERTYQ
LLSQVTGRAGRAEKPGRAMLQTYQADAAVLQALASGDRDAFLAAEAMGRQELGFPPYGRL
AAVTLRSPDEVALDRAANAMRATAPVADGIEILGPARTPIYRLRGIARMRLLVKARRNVN
LQAYLSDWLKRTKSQSGVRITLDINPYSFM
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatgcaacagcttctttatcctgagctcgcgtcaagcgcgacagcgccttcg
ggtgatgccgacgcgggcccgcgggtgagcgttctttttccgctgccattgccgaaagcc
tatgattatctttgcgatagcgaggaattgccgccggtgggcagtttcgtctccgcaccc
tttggcccgcgcgaggtaaccggcgtggtctggcctgccaataaaggcgaggccaagaaa
aagaacgccaaggttcaaaaccttaaaaccatcagccgcgtgtttgatgcgccgccgctc
gcgtctgaccttgtggatttcattgattgggccgcggattatacgatgtatcccaaaggc
gcgatcttacgcatggtgatgcgggttaaagatgcgtttgacggcccgcgcatgcagacc
gcctttgttgccactggggaaaagccggcgcgcataacgcctaagcgtgaagccgtcttg
gcggcggctggcgctgaaccacaaacggctgcgcaattggctgaagcctcggggatgagc
gaggcggtggtgcgcgggctcgtcagcgcaggaagccttgccaaggtcgaggtcgatccg
gacccgccttttgatgcgccggatttgatgcgcgcggggccaacgctttccggtgatcag
caatatgccgctgactttgtcgccgagatcattgcccgtgatgagcataaagccattctg
gtcgatggcgtgaccggctccggtaaaacggaagtttattttgaagccgtggctgcggcg
ctacgcaaagacccggatgcgcaagcgctgattttattacctgagattgctttgaccctt
cccttccttgagcgggttgaggcgcgctttggggccgcgcctgcgccgtggcattctgat
ttgaccggtgcccagcggcggcgcacttggcgacgcgtcgcagaaggacaggcccgattg
gtagtcggcgcgcggtcggcgctctttttgccgtttccaaaattgcaattgatcgtcgtc
gatgaggaacatgacagcgcctataaacaggaggagggcgtgatctatcatgcccgggat
ctggcggtggcgcgtggcgcgcgtgcgggctttccggttttgctggcgtcggccacgcca
tcacttgaaacggtcgtgaatgtcgatgagggccgctatgaagcggtggggctggcgggg
cgttttaatgatgcgcagatgccggacatttcactgattgatatgcgcgaagatgcgccc
gatgcgggaaagtggctttcgccgcgattggttgatgagatcaatgcgaacttatccgca
ggcgaacaatccctgttgtttttaaataggcgcggctatgcgccgctgacattatgtcgg
cgctgcggacataaaatgaccgcccccggatcagatacgatgttggttgagcatcgtttt
gaaaatcgtttggtgtgtcatcacacagggttctcgatgccaaaaccatccgtatgcccc
gtatgtaaggcggtggattctttggcggcctgtgggccgggcgttgagcgcgttgccgaa
gaggcaaaggagcgttggcccgacgcacggattgaggttttgtcctctgatactgcgccg
gggccgcgcactatgcgtgcggtgcttgatgcgatgaaagccggcgagattgatattctc
atcgcaacccaggttgctgccaaaggacatcattttcccaaccttacgcttgtcggggtg
gttgatgctgatctcgggctggcgggcggtgatctgcgcgccgcagagcggacctatcag
ttgttgtcacaggtcacgggccgcgcgggacgcgcagaaaagcccggccgcgccatgctt
caaacctatcaggcggatgcggcggttttacaggccttggcctcgggtgatcgcgatgct
tttttggcggcggaggcgatgggccggcaggaattgggtttcccgccctatggccgatta
gccgccgtgacattgcgctcacccgatgaagtggcgctcgaccgcgcggcaaacgctatg
cgcgcaacggctccggtcgctgatggtatcgaaattcttggccctgcgcgaacgccgatc
tatcggttgcgcgggatcgcgcgcatgcgtcttttggtcaaggcacggcgtaatgtgaat
cttcaggcgtatttgtcggattggctgaagcgaacaaaaagccaaagcggcgtgcggatt
accctcgatatcaatccctattcctttatgtga
DBGET
integrated database retrieval system
