Hyphococcus formosus: ABFZ83_13510
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Entry
ABFZ83_13510 CDS
T10776
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hfo Hyphococcus formosus
Pathway
hfo03030
DNA replication
hfo03410
Base excision repair
hfo03420
Nucleotide excision repair
hfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABFZ83_13510 (polA)
03410 Base excision repair
ABFZ83_13510 (polA)
03420 Nucleotide excision repair
ABFZ83_13510 (polA)
03440 Homologous recombination
ABFZ83_13510 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfo03032
]
ABFZ83_13510 (polA)
03400 DNA repair and recombination proteins [BR:
hfo03400
]
ABFZ83_13510 (polA)
Enzymes [BR:
hfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABFZ83_13510 (polA)
DNA replication proteins [BR:
hfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABFZ83_13510 (polA)
DNA repair and recombination proteins [BR:
hfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABFZ83_13510 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABFZ83_13510 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XMO96635
LinkDB
All DBs
Position
2895569..2898361
Genome browser
AA seq
930 aa
AA seq
DB search
MAKKTKTARRLYLVDGSGYLFRAYFAMARSRQGLTRKSDGLPVGAVLGFSNMLNKLLTDM
QDEHDPTHLAVIFDHSGKTFRNDIYTEYKGNRPDAPEDLIPQFPLVREATRAFNVPCIET
EGFEADDIIATYARKAEADGDEVVIISSDKDLMQLVSDNISMFDPMKNKRIGREEVIEKF
GLPPENVVDIQSLAGDSSDNVPGVPGIGIKTAAQLIEEYGDLETLLERASEIKQNKRREN
LIEFADQARISKKLVELCADVPLDDGLDSLALRSIDLDLLMPFLEKMEFNQLIERIKRDF
GDDRSLVSEGSTMTGAAGEQEYETIFDEAALQKWIDAAYVRGVIAVDTETNSLNAMRASL
VGISMATQPGQACYIPLGHGGDGLALDDEDAAKQIPLEKAISLLKPMLEDPAVLKVGQNM
KYDALVLSRYGVNIAPFDDTMLISYALDCGRGGHGMDELAKRHLDYDTIKFSDIAGTGKK
AKTFDQIHIKEAAKYAAEDADITLRLYQVLKPRLAAEGKTTVYETLERPLAPIIVGMERE
GVKVDRSVLSTLSSDFAQRMAASEAEAYELAGEEFKLGSPKQIAEILFGKLDMPGGRKTA
KGAWSTNAEVLEELAAAGHDLPRVILEWRSLSKLKSTYTDALPEDIHPETGRIHTSYSLA
ATTTGRLSSNDPNLQNIPIRTEDGRKIRTAFVHEKGNVLVAADYSQIELRLLAHIADLKS
MKQAFADGIDIHAMTASEMFGVPVKDMDPMVRRRAKAINFGIIYGISAFGLANQLGISRG
EAKDYIDAYFKKFPGIRHYMDETIAFAKSHGYVETIFGRRTYVGGIKEKNPAMRGYSERQ
AINAPIQGAAADVIRRAMIRMPQALQDAGLGAKMLLQVHDELIFECAKGEAKKVCDLVSK
IMIGAPQPAVTLSVPLVVGARPGSNWGEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaaaccaaaactgctcggcgtctctatctcgttgacggctccggctattta
tttcgcgcctattttgcgatggcgcgcagtcggcaagggttaacccgcaaatcagatggc
ctgccggttggtgcggtccttggtttttcgaatatgctcaacaagctattgaccgatatg
caagacgagcatgacccgacgcatcttgcggttatttttgaccattccggcaaaaccttc
cgaaatgatatttatacagaatataagggaaatcgcccggatgcgccggaagatttgatc
ccgcaatttccgctcgtgcgcgaggcaacccgcgctttcaatgtgccctgtattgaaacc
gaagggtttgaagcggacgatattatcgccacttatgcccgcaaagccgaggcggatggg
gatgaggttgttatcatttcttcggataaggatttgatgcagctcgtaagcgataacatt
tcgatgtttgatccgatgaaaaacaaacggatcggtcgggaagaagttattgagaaattt
gggttgccgcctgaaaacgtcgtcgatattcaatcgctggctggcgattcttcggataat
gtgcccggcgtgcccggcatcggcattaagaccgctgcgcaattgatcgaagaatatggt
gatctcgaaacgcttttggagcgggcatcagagatcaaacaaaataagcgccgggagaac
ctaatcgaatttgcggatcaggcgcgtatttcgaaaaagcttgtcgagctttgtgctgac
gtgccgcttgacgatggtctggattcgcttgcgctgcggtcgatcgacctcgatttgttg
atgccgtttcttgagaagatggaattcaatcagctcattgagcggatcaagcgggatttc
ggtgatgaccgaagcctcgtgtccgaaggtagcaccatgaccggtgccgctggagagcag
gaatatgagaccatttttgacgaagcggcgctgcaaaaatggattgatgctgcctatgtg
cgcggcgttatcgcggtggatacggaaaccaacagccttaatgcaatgcgcgcgtctttg
gttggtatttcgatggcgacccagccggggcaggcgtgttacatcccgcttggtcatggt
ggtgatggcctcgcgttagatgacgaagacgccgccaaacaaatcccgttagaaaaggca
atttcccttttgaaaccgatgctggaagacccggcggttttgaaggtcgggcaaaatatg
aagtatgacgcgttggtattgtcacgatacggcgtaaatattgcgccattcgatgatacg
atgctgatttcctatgcgctcgattgtggtcgcggcggacatggcatggatgaactggcc
aagcgtcatcttgattatgatacgatcaagttttcggacattgcggggacaggcaaaaaa
gcaaagacctttgatcaaattcacatcaaagaagcggcgaaatatgcggctgaagatgct
gatattacgctgcggctttatcaggttctcaaaccgcgcctggcggcagagggtaaaacg
acggtctatgaaacgctcgaacgacccctggcaccgatcattgtcgggatggagagggaa
ggcgttaaggtcgatcgatctgtgctttctacgctgtcatcagactttgctcagcgcatg
gctgcatctgaggccgaggcctatgagcttgcgggcgaagagttcaagctcggatcgcca
aaacagattgcagaaatcctgttcggaaaacttgacatgccgggcggacgcaagaccgca
aaaggggcatggtcgaccaatgcggaggtgctcgaagagctggctgctgcgggacatgac
cttccacgggtgattttggagtggcgcagcctttccaagctgaaaagtacctatacggat
gccttgccagaagatattcaccctgaaacaggccgcatccacacgtcatattcattagcg
gcgacaacaaccgggcgactttcgtcgaacgacccgaaccttcaaaacattccgatccga
accgaagatggccggaaaatccgtacggcctttgttcatgaaaaaggaaatgtgcttgtc
gcagcggactatagccagatcgaacttcgcttactggcgcatattgccgatctgaaatcc
atgaaacaggctttcgccgacggtattgatattcacgcgatgaccgcgtcggagatgttt
ggcgtgcccgtaaaggatatggacccgatggtccgtcgccgcgccaaagccatcaatttc
ggcatcatctacggcatttccgcctttggtcttgctaatcagctcggcattagccgcggc
gaggccaaagattatatcgatgcctatttcaagaaattcccgggtattcgccattatatg
gatgaaaccatcgcctttgcgaaatcgcatggctatgtggagacgatctttggccgccgc
acctatgtgggcgggatcaaagaaaagaatcctgcgatgcgcggatattcagagcgtcag
gcgatcaatgcgccgattcagggtgcggcagcagatgttatccgccgtgcaatgatccgt
atgccgcaagcgcttcaagacgcggggcttggcgcgaagatgctgttacaggtgcatgac
gaattgattttcgaatgcgccaaaggagaggcaaagaaagtttgcgatctcgtttccaaa
attatgatcggcgcaccacaaccagccgtcaccttaagtgttccgctggttgtcggtgcg
cgtcccggcagtaattggggtgaggcgcattaa
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