Hyphococcus formosus: ABFZ83_13940
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Entry
ABFZ83_13940 CDS
T10776
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hfo Hyphococcus formosus
Pathway
hfo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFZ83_13940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfo03400
]
ABFZ83_13940
Enzymes [BR:
hfo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABFZ83_13940
DNA repair and recombination proteins [BR:
hfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABFZ83_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XMO96718
LinkDB
All DBs
Position
complement(2993401..2994207)
Genome browser
AA seq
268 aa
AA seq
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MEHTDEQAARALLRWYAEMGVDEAVAPQPADLYSWTAQEQTFARPTRQSADRAPAPQPQP
VAPEPTVDEAIKTAEKIAAACGDFEALDAAVRSFDGCPLKTGAKNTVFTDGVVGAELLVI
GEAPGREEDQTGKPFVGRAGQLLDRMLASIGRSRTENALISNVIFWRPPANRAPTPLETA
VCRPFVDRLIEISAPKAILIAGGAPLQALLGVTGIMRARGIWREVETANGTAIPAIPTYH
PAFLLRQPTGKRLAWADLQSLAEKLKER
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaacacacagacgaacaggcggccagagccctcctccgctggtatgcggaaatgggc
gtcgacgaagcggtcgcccctcaacctgcagatctctatagctggaccgcccaggaacag
acgtttgcccgccccacgcggcagagcgcggaccgtgctcctgcgccgcaaccgcaaccc
gttgcgcctgaacctacggtcgatgaagcgatcaaaactgccgagaaaattgcggctgcc
tgcggtgatttcgaagcgctggacgctgctgttcggtcgtttgacggatgtccattaaaa
accggagcgaaaaataccgtctttaccgatggcgtcgttggtgccgaattgctggtgatt
ggcgaagccccggggcgcgaagaagatcagacagggaaaccgttcgtcggtcgtgcgggt
cagttgcttgatcgcatgctcgcaagcataggccgatcgcgcacagaaaatgccttgatt
tccaatgttattttttggcggccaccggcaaatcgcgcgcccacaccactggaaaccgca
gtctgccgcccatttgtcgatcggttaattgagatttcggctcccaaggcaatcttgatt
gctggcggcgcaccgttacaggccctattgggtgttaccggcatcatgcgcgcccgcggt
atctggcgcgaggtagaaaccgccaacgggaccgcaattcctgctataccgacttatcat
cccgcatttctgttgcgccaaccgaccggcaaacggctggcatgggcggaccttcaatcc
ctcgccgagaagttaaaggagcgttaa
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