Hyphococcus formosus: ABFZ83_14045
Help
Entry
ABFZ83_14045 CDS
T10776
Name
(GenBank) transcription antitermination factor NusB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hfo Hyphococcus formosus
Brite
KEGG Orthology (KO) [BR:
hfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hfo03009
]
ABFZ83_14045
Enzymes [BR:
hfo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
ABFZ83_14045
Ribosome biogenesis [BR:
hfo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ABFZ83_14045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
FtsJ
Methyltransf_31
Methyltransf_25
RsmF-B_ferredox
Methyltransf_15
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
XMO96739
LinkDB
All DBs
Position
complement(3015747..3017297)
Genome browser
AA seq
516 aa
AA seq
DB search
MNEKSKNDRPARPRAASGRPGGPRDRGAKNGDRPQRSHRSGPDRGGPDRAKGDRRSDRGP
VKPGRDNDRPKSDEAPARKPLPAGLESRYAALEILDRVHEGATLEDALARTRPFENLEGS
DRGFARALASETLRRRGSIDHIIGGYLDRPLPKKSARVMDILRIAAAQSLLMDTPPHAAV
STSVDLANDRAETKGYSSLVNAIARKIAADGPAILEKLPARTDTPSWLWRSWERAYGPNG
VKAIAEAHRKPAPLDLSFKPGEDLEAWRDRFVEAGNDARIMPTGTIRMSRISDVSSLPGY
DDGAWWIQDLAASLPAKLLGDVAGKRVFDLCSAPGGKTLQLAALGGKVTSLDKSGARLER
VVTNLKRSDLTAFLVEEDVLRYRPEEKADAILLDAPCTATGTIRRHPDIPWNKGETTMTA
LADLQGKMIDHAISLLKPGGVFVYCVCSLQREEGEAQAKAALKRNPSIERIPVRPEEIGG
LEKLINRDGDLRTTPAMLSDDGGLDGFFAVRFKHKD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaatcgaaaaatgaccgcccagcccgcccgcgcgccgcttctggccggccc
ggtgggccccgcgaccgcggcgcaaaaaacggcgaccgtccgcaaagatcgcaccgtagt
gggccagaccgtggtggcccagaccgtgccaagggtgaccgacggtcagatcgtgggccg
gtaaagccaggccgcgataatgaccgcccgaaaagcgacgaagcgcctgcccgcaagccc
ctccccgccgggctggaaagccggtatgccgcgctcgagattctggatcgcgtacatgaa
ggggcgacactcgaagacgcactggcccgaacacggccctttgaaaatctcgaaggttcg
gatcgcggtttcgcccgcgcgctggcaagtgaaacccttcgtcgccgcggatccatcgat
cacataatcggcggctatctcgaccgcccgctgccgaagaaatcagcgcgcgtgatggac
atattgcggattgccgctgcgcaatctttgttaatggacacgccgccccatgctgcggtc
tcaacctctgttgatctcgccaatgaccgcgccgaaaccaagggctattcttcacttgtg
aatgccatcgcccgaaaaattgctgctgatggtccagccatcctcgaaaaattgcccgcg
cgaaccgatacgccttcttggttgtggcgtagctgggaacgtgcctatggaccaaacggc
gtaaaagccatcgccgaagcacaccgcaaaccagcaccgctcgatctgagcttcaagccg
ggtgaagaccttgaggcttggcgcgatcgctttgttgaggccggaaacgacgcgcggatc
atgccgaccggaacgatcagaatgagccgcatcagcgatgtttcgtcattgccaggctat
gatgatggcgcatggtggattcaggacctggcagcgagcctccctgcgaaattgctaggc
gatgtggcgggaaagcgggttttcgacctgtgctccgcgccgggcgggaaaacgctgcaa
ctggccgcccttggcggaaaagtgacatcgctcgacaaatccggtgctcgtttggagcgc
gttgtcaccaatctcaaacgatcagacctcacagcatttttggttgaggaagatgtcctg
agatatcgccccgaggaaaaagccgatgcgatcctcctagatgccccatgcacggccact
ggcaccattcggcgacacccggatattccgtggaacaagggcgaaaccacgatgaccgcg
ctcgcggatttacaaggtaaaatgatcgatcacgcgatctcattgctcaaacccggcggt
gttttcgtctattgcgtatgctccttgcagcgggaagaaggcgaagcccaagcgaaagcc
gccctcaagcgcaatccatctattgagcggatcccagttcgaccagaagagattggcggc
cttgaaaagctgatcaatcgcgacggcgatctgcgaaccacgccggcaatgttatctgac
gacggcggtctggatggcttttttgcggttaggttcaaacacaaggattag
DBGET
integrated database retrieval system
