Hyphococcus formosus: ABFZ83_14475
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Entry
ABFZ83_14475 CDS
T10776
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hfo Hyphococcus formosus
Brite
KEGG Orthology (KO) [BR:
hfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hfo03009
]
ABFZ83_14475
Enzymes [BR:
hfo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ABFZ83_14475
Ribosome biogenesis [BR:
hfo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ABFZ83_14475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRAM
Methyltransf_31
MethyltransfD12
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
XMO96823
LinkDB
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Position
3113602..3114846
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AA seq
414 aa
AA seq
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MPEHVASVTIETLGHRGDGIAGLADQRIHIPYTVPGDEVKIRYRGDRGRLEKLIAPGPDR
TQPPCPYYGKCGGCSVQHITSEFYKRWKCETVTTALERVGIARSIVAPMISCPPNTRRRA
QFAVRKTKGQIHLGFFERGSITLVNIDACLVLSPGLNAAIPALKALAAATPENWQKFNIM
VTQCDNGLDVSLTGSDVDEDLFGAALSRLIDAARDHEFIRLSIGDLPIVVFSEPVISLSG
VDITIPPGVFLQASREGEQALVDLVKPHIAKARRVADLFSGCGTFSFIADTEVHAFDIEG
PAIEALDIAARRADRRHPVKAHKRNLFEQPLVPDELKDFDAVIFDPPRAGASAQAKQLAS
CEVPVIIGVSCNPASFARDAAKLIEGGYHLSHVTPVDQFVYAAHVELVGVFRKG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaacatgttgcgagcgtcaccatagaaacgcttggtcatcgcggcgatggcatc
gccgggcttgcggatcagcgcatacatattccgtacacggtccccggagatgaggttaaa
atccgctatcgtggtgatcgggggcgtcttgaaaaactcatcgcgcccggcccggatcgg
acacagccgccatgcccttattatggcaaatgcggcggctgctcggttcagcacatcaca
tccgaattttacaagcgctggaaatgcgagacggttacaacggcgctcgagcgcgtcgga
atcgctaggtcaatagtagccccaatgatctcctgtccgccgaacacccgccggcgggcg
caatttgcggttcgcaaaaccaaggggcaaatccatctcggtttttttgagcgtggttcg
atcacgctcgtgaatatcgatgcgtgtcttgttttgtcacccggccttaacgctgcgatc
ccggcgctcaaagccctcgccgcagcgacaccggaaaactggcagaaattcaatataatg
gtcacgcagtgtgacaatggcttggatgtatctttgacgggcagcgatgttgacgaagac
ctattcggtgcggcgctctcgcgattgatcgatgcggcgcgcgatcatgaattcatccgg
ttatccattggcgatctgccaatcgtcgtattttcggagccggttatatcattgtccggt
gtagacattacaattccgccgggtgtttttttacaagccagtcgtgagggcgaacaagcg
ctcgttgatcttgtgaaaccgcatatcgcaaaggcgaggcgcgttgcagatttattctcc
ggttgcggaacattttcatttattgctgacactgaagtccacgcatttgacatcgaaggc
ccggcgattgaggcgctcgacattgccgcaaggcgcgcggatcgtcgtcatcccgtcaag
gcgcataaacgtaatttgtttgaacagccattggtccccgatgagctaaaagattttgat
gcggtcatttttgatccgccccgtgccggggcttcggcccaggcaaaacaactggcatcc
tgtgaagtccctgtcattattggggtttcttgcaacccggccagcttcgcgcgtgatgcg
gcaaaattaatcgaaggtggctaccacctgtcgcacgtgacgccggttgatcaattcgtg
tatgctgcccatgtcgagcttgttggggtatttcgaaaaggatga
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