Herbaspirillum frisingense: G5S34_00020
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Entry
G5S34_00020 CDS
T06761
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfr03032
]
G5S34_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_00020 (gyrB)
Enzymes [BR:
hfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G5S34_00020 (gyrB)
DNA replication proteins [BR:
hfr03032
]
Prokaryotic type
DNA Topoisomerases
G5S34_00020 (gyrB)
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5S34_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QNB05327
UniProt:
A0A7G6AQP3
LinkDB
All DBs
Position
3282..5780
Genome browser
AA seq
832 aa
AA seq
DB search
MSSSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID
EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD
QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKHYAMEFAKGIVQNRELEMIDGVQVSP
IKVVGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE
DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTLVSVDVSMQWNDAFNEQVLCF
TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE
PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR
ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK
VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL
LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDVEEAQYMMQIALNDAEIKPA
EDAPAISGDALIELARQYNTANAIIMRLSRAIDDAALSAIMTGGVVLKMENIEQATATAA
ELKKAINDSNIDVQARVDELSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET
FKGLIRKGATVARGQGEKRKESAITDFRQAMGWLRDEAERGVNKQRYKGLGEMNPEQLWE
TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccagccccgcagacaacaccaattccgcgcaacaaagctatggcgcttcttcc
atccagatcctggaaggcctggaggcggtgcgcaagcgtcccggcatgtacattggcgac
acctctgacggcaccggcctgcaccacctggtgttcgaagtgctggacaactccatcgac
gaagccctggcaggctactgcagcgagatccacgtcaccatccacgccgacaactccatc
tccatcaccgacaacggccgtggcattcccaccggcctgaagatggacgacaagcacgaa
cccaagcgctccgccgccgagatcgtgatgaccgagctgcacgccggcggcaagttcgac
cagaactcctacaaggtctccggcggcctgcacggcgtgggcgtgtcctgcgtgaacgca
ctgtcgaagaaactgaagctgaccatccgccgcgacggcaagcactacgccatggaattc
gccaagggcatcgtccagaaccgcgaactggaaatgatcgacggtgtgcaggtctcgccc
atcaaggtcgtgggcgaatccgacaagcgcggcaccgaagtccacttctgggccgacgaa
gaaatcttcacccacgtcgaattccactacgagatcctggccaagcgcatccgcgaactg
tccttcctcaacaacggcgtgcacatcaagctgaccgaccagcgcaccggcaaggaagaa
gacttcgccttcgaaggcggcacccgcggcttcgtcgaatacatcaacaagaacaagagc
atcctcaacccgaccatcttccaggccaccggcgagaagcaatcggaccagggcacgctg
gtctcggtggacgtctccatgcagtggaacgacgccttcaacgaacaggtgctctgcttc
accaacaacatcccccagcgtgacggcggcacccacctgaccggcctgcgcgcggccatg
acccgcgtcatcaacaagtacatcgaagaaaacgatctcgccaagaaggccaaggtcgaa
atctccggcgacgacatgcgtgaaggcctcacctgtgtgctctcggtgaaggtacccgag
cccaagttcagctcccagaccaaggacaagctggtctccagcgaagtgcgcggccccgtg
gaagaaatcgtcgccaagaccctgaccgacttcctcgccgagaagcccaacgacgccaag
atcatctgcggcaagatcgtcgaagccgcccgcgcccgcgaagccgcccgcaaggcccgc
gaactgacccgccgcaagggcgtcatggacggcctgggtttgtcgtccaagctggccgac
tgccaggaacgcgacccggccctgtgcgagctctacatcgtcgagggtgactccgcaggc
ggctcggccaagcaaggccgcgaccgcaagttccaggccatcctgccgctgcgcggcaag
gtgctgaacgtggagaaggcacgcttcgagaagatgctctcctccgaacagatcacgacc
ctcatcgccaccctgggcaccagcatcggcgctgacgaattcaacccggacaagctgcgc
taccaccgcatcatcatcatgaccgatgccgacgtcgacggcgcccacatccgcaccctg
ctgctgaccctgttctaccgccagatgccagccctggttgaacgcggccacatctatatc
gcccagccgcccctgtacaaggtcaaggccggcaaggacgagcgctacctcaaggacgac
gtcgaggaagcgcaatacatgatgcagatcgccctgaacgatgccgagatcaagcccgcc
gaagacgcccccgccatcagcggcgatgcactgatcgaactggcccgccagtacaacact
gccaacgccatcatcatgcgcctgtcgcgcgccatcgatgacgccgccttgagcgccatc
atgaccggtggcgtggtactgaagatggaaaacatcgaacaagccaccgccaccgcggcc
gaactgaagaaggccatcaacgacagcaacatcgacgtgcaagcccgcgtggacgagctc
agcgaaaaggtcgccctgcacatccaccgtcgccagcacggcaacatcaaggccaccgtg
atcgatgccgacttcgtcagcggccccgactaccaggtgctctccaccgccgccgagacc
ttcaagggcctcatccgcaagggtgccacggtggcccgtggccagggcgaaaaacgcaag
gaatccgccatcaccgacttccgccaggccatgggctggctgcgcgacgaagccgaacgc
ggcgtcaacaagcagcgctacaaaggcctgggcgagatgaaccccgagcagctgtgggaa
accaccatggacccgaccgtgcgccgtttgttgaaggtgcagatcgaggatgccattgcg
gccgatcagatcttcatgacgttgatgggcgatgatgtggagccgcgtcgggcgtttatt
gagtccaatgcgttgcaggcggggaatattgatgtttga
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