KEGG   Herbaspirillum frisingense: G5S34_00145
Entry
G5S34_00145       CDS       T06761                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hfr  Herbaspirillum frisingense
Pathway
hfr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hfr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    G5S34_00145
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hfr02044]
    G5S34_00145
Secretion system [BR:hfr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   G5S34_00145
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF3540 DUF6484 Phage_Mu_Gp45 Sarcoglycan_1
Other DBs
NCBI-ProteinID: QNB05346
LinkDB
Position
36222..39008
AA seq 928 aa
MVFRSLKESLTGYSDIARSIHLRLMQPPPAEPGPAYAPRLDELLLVTHVSGHEAVCDAFE
YRLHCISAQADLPLKDFIALPAEIRFVTDRGQLRRVSGLIAEASAGEVEDGLASYRLILR
DALALMGQRSNTRVFLHANELDVTQVLLSEWRRINPVLTSCFDVDWSLLAGGYPLREFTM
QHNESDGDFLRRLWKRRGIGWFIRPGEPAQEDRTGRPTHTLVLFNDAFQLPANAAGTVRY
HRDHAPGEQDSITHWSAVRTLQPGSVNRYGWDHAKGGPMRSRETTRADQGILGSRFAASV
DDYRIDAPRTGNESEDYRQLGKLRMQRHAYESKCFQARSTVRALRVGEWITVEDHPELDR
HPAHEREFIITSLDVEAENNLPHSLATKVKALSLRNRWEIGDEDGHQGVESPNQGAPTRT
FRYRNHFSCVRRGTPVVPAFDPRQDVPTPRLQNAHVVGPPNEAVFCDALGRVKIRFPGTR
IEDHRHANGAGASDSGRDSAWVRVASTWAGNQWGAISLPRVGEEVIVDFLGGDPDKPIII
GRVHGATSLPPSFSDIGALPANRFLAGIKSKEVRGHRYNQLRLDDTPREISAQLASQHGY
SELNLGWLTHPRDQGFGTARGEGAELRTDQSLALRGGQGVLISAAARPAAGGGQLDRQEL
LGLMTALQDVQQQLATLAQTHRAGDTEARALSALRERLERWEAGSNTDKEGSGGGHPLVA
VTAPAGVAVSSEDSIAIGAQTQIDMISVGNTQLSVGKKLLARVAESISLFAHRLGIKLVA
ASGKLELQTDADNIEATSAKRIVLTAAEEIVLQAPRLRFVAQGAQIDLGGGAITQQSSGD
HVIRSADFHHLGGADAHVPEITLPVSNVPTDERFILARRGSGRPHAHQRYRIELDDGSAM
EGITDEQGRTELSQDMALRIARLHLLKE
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggttttccgctctctgaaggagtcgcttacgggctactccgacatcgcacgcagtatc
catttgcggctgatgcagccgccacccgccgaacccggaccggcttatgcgccgcgcctg
gacgagctcctgctggtgacccacgtctcaggccatgaggccgtctgcgatgcattcgaa
taccgtctgcactgcatctccgcccaggccgatctgccgctcaaggactttatcgcgctg
cccgccgagatccgcttcgtgaccgatcgtggccaattgcgcagggtgtccggcctgatt
gccgaggccagtgccggtgaagtcgaggacggcctcgccagctatcggctgatcctgcgc
gatgccctggcgctgatgggccagcgcagcaatacgcgggtgttcctgcatgccaatgag
ctcgatgtcacgcaggtgctgctctccgagtggcgcaggatcaatcccgtgctcacgtcc
tgcttcgacgtcgactggagcctgctggccggaggctatcccttgcgcgaattcaccatg
cagcacaacgagtccgatggcgacttcctgcgccggctctggaagcggcgcggcataggc
tggttcatccgcccgggcgagccggcacaggaggaccgcacaggccggccgacccacacc
ctggtgttattcaacgatgccttccagttgccggccaacgccgccggtacggtgcgctat
caccgcgatcatgcgcccggcgaacaggacagcatcacgcactggagcgcggtgaggacc
ttgcagcccggcagcgtcaatcgctacggctgggaccacgccaagggcggccccatgcgc
agccgtgaaaccacccgggcggaccagggcatcctcggcagccgcttcgccgccagtgtg
gatgactaccggatcgacgccccgcgtaccggcaacgaatcggaggactatcgccagctt
ggcaaattgcgcatgcagcgccacgcatacgaatccaaatgcttccaggcccgctccact
gtgcgcgcactgcgcgtgggcgagtggatcaccgtcgaagatcatccggagctggaccgg
catcccgcccacgagcgggagttcatcatcaccagcctcgacgtcgaggccgagaacaac
ctgccgcatagcctggcgaccaaagtgaaggccttgtcgcttcgaaaccgatgggaaata
ggcgacgaggatggacaccagggcgttgaaagcccgaatcaaggtgcgcccacccggacg
ttccgctaccgcaaccatttttcctgtgtacggcgcggcaccccggtggtaccggccttc
gatccgcgacaggatgtgccgacgccccgcctgcagaacgcgcacgtggtcggtcctccc
aacgaggcggtattctgcgacgcgcttggccgggtcaagatccgctttcccggcacccgg
atcgaggatcatcgccacgccaatggcgccggtgccagcgacagcgggcgcgactcggcc
tgggtgcgcgtggccagtacttgggccggcaaccagtggggcgcgatcagtctgccccgg
gtgggcgaggaagtcatcgtcgactttctcggcggtgatcccgacaagcccatcatcatc
ggtcgcgtgcacggtgccacctccctgccgcccagcttcagcgacatcggcgccctaccg
gccaaccgcttcctggccggcatcaagagcaaggaagtccggggccaccgctacaaccag
ctacggctggacgacacgccgcgcgaaatcagcgcgcagctcgcctcccagcatggctac
agcgaactgaacctgggctggctcacccatccccgcgaccagggttttggcaccgcgcgg
ggtgaaggcgcggagttgcgcaccgaccagtcactggccctgcgcggtggacaaggcgta
ctgatcagcgccgccgcacgcccggccgccggtggagggcaactcgacaggcaggagttg
ctcgggctcatgacggcgctgcaggacgtccagcagcaactggccaccctggcacagacc
caccgtgccggcgacaccgaggcccgcgccctgagcgcattgcgtgaacgcctcgaacgc
tgggaagccggcagcaacaccgacaaggaaggcagcggcggcgggcatcccctggtcgcc
gtgaccgctccggccggtgtcgccgtcagcagcgaagacagtatcgccatcggcgcacag
acccagatcgacatgatcagcgtgggcaacactcagctttcggtgggcaagaagctgctg
gcccgcgtggccgaaagcatcagcctgttcgcccatcggttggggatcaagctggttgcc
gccagcggcaagctggaactgcagacggacgccgacaacatcgaagccacctctgccaaa
cgcatcgttctcaccgccgcagaagaaatcgtgctgcaggcaccgcgcctgcgcttcgtt
gcacagggcgcgcagattgatctcggcggcggcgccatcacccagcagagcagtggcgac
catgtcatccgctcggccgatttccatcacctgggcggcgcagacgcgcacgttcccgag
atcaccctgccggtcagcaatgtgccgactgacgagcgcttcatattggcccggcgcggc
agcgggcgaccccatgcgcaccagcgctaccgcatcgaacttgacgatggcagcgccatg
gaaggcatcaccgacgagcagggccgcaccgaactgagccaggacatggctttgcgcatc
gcccggctgcatctactgaaggagtag

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