Herbaspirillum frisingense: G5S34_02480
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Entry
G5S34_02480 CDS
T06761
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5S34_02480 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hfr03019
]
G5S34_02480 (recQ)
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_02480 (recQ)
Enzymes [BR:
hfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S34_02480 (recQ)
Messenger RNA biogenesis [BR:
hfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G5S34_02480 (recQ)
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G5S34_02480 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNB05755
LinkDB
All DBs
Position
533671..535515
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AA seq
614 aa
AA seq
DB search
MVDFDSLPAGATQQERALHVLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLC
YQVPALLRAGTGVVVSPLIALMQDQVDALAEVGVRAAFLNSTQSFDEAMQIERRLRQGDL
DLLYVAPERLMTPRCLELLESSRISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPRVP
RIALTATADQQTREEIIHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHP
EDAGIVYCLSRKKVEETAEFLRGEGINALAYHAGMDYALRTANQARFLREDRIVMVATIA
FGMGIDKPDVRFVCHLDLPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMIDES
EADDSFKRVQSTKLDAMLSLCETLHCRRVHLLDYFGEKSGPCGNCDTCLTPPVSFDATVE
VQKLLSTVYRVDQRFAPGHVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAEWRAILRQ
VIALGLLTVDAENYSALKLTEAARPVLRGEQQVQLRRYRKPEKAKRSSQRSGFVETDLNT
EEQALFEKLRWWRVETARAHNVPAYVIFHDATMREIAKARPQSLDDLRHVTGVGEKKLET
YGDQIIALIAEMQA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatttcgattccctgcccgccggcgccacccagcaagaacgcgcattgcatgtg
ctggagacggtgttcggttattcgtcctttcgcggtcatcagggcgagatcgtccagcac
gtcgccggcggcggtgatgccctagtgctcatgcccaccggcggcggcaagtcgctgtgc
taccaggtaccggccttgctgcgcgccggcaccggcgtggtggtctcgccgctgatcgcc
ctgatgcaggaccaggtggacgcgctggccgaagtcggcgtgcgcgccgccttcctcaat
tccacccagagcttcgacgaagccatgcagatcgagcgccgcctgcgccagggcgacctc
gacctcctctacgtcgctcccgagcggttgatgacgccgcgctgcctggaactgctcgaa
tcctcccgcatctccctcttcgccatcgacgaagcgcactgcgtctcgcaatggggccac
gatttccggccggaatacatcaagctgtcggtactgcacgagcgcttcccgcgggtgccg
cgcatcgccctgacggccaccgccgaccaacagacccgcgaagaaatcatccaccgcctg
caactggaagatgcacgccagttcgtctcttccttcgaccgccccaacatccgctaccag
atcgtggaaaaggccaacggtcgcaagcagctgctggacttcatcaagagcgaacacccc
gaggatgccggcatcgtctattgcctctcgcgcaagaaggtcgaggaaaccgccgaattc
ctgcgcggcgaaggcatcaatgccctggcctaccatgccgggatggactacgcgctgcgc
accgccaaccaggcgcgtttcctgcgcgaggaccggatcgtgatggtcgccaccatcgcc
ttcggcatgggtatcgacaagcccgacgtacgcttcgtctgccacctggacctgcccaag
agcgtggaaggctattaccaggagaccggccgcgccggccgtgacggcttacccgccgac
gcctggatggcctatggcctgcaggacgtggtgcagcagcgccgcatgatcgacgaatcc
gaagccgacgacagtttcaaacgcgtccagagcaccaagctcgacgccatgctgtccctg
tgcgaaaccctgcactgccggcgcgtgcacctgctcgattacttcggcgagaagtccggc
ccctgcggcaattgcgatacctgcctcacgcccccggtgtccttcgatgccaccgtcgag
gtgcagaagctgctgtccaccgtctatcgggttgaccagcgcttcgcgccaggtcatgtg
atcgaggtgctgcgcggtatcgatggcgagcgcgtcaagcagtggcggcacgaccagctc
tccgtcttcggtgtcggcagtgaccgtggcgaagccgaatggcgtgccatcctgcgccag
gttatcgccttgggcctgctgacggtggatgccgagaactacagcgccctcaagctcacc
gaagccgcccgcccggtgctgcgtggtgaacagcaggtgcaattgcgccgttaccgcaag
ccggaaaaggccaagcgcagttcccaacgttccggttttgtcgagaccgatctcaacacc
gaagaacaggcgctcttcgaaaaattgcgctggtggcgcgtcgaaaccgcgcgcgcccac
aacgtccccgcctacgtcatcttccacgatgcgaccatgcgcgaaatcgccaaggcccga
ccgcaatcgctggacgacctgcgccacgtcaccggcgtgggcgagaagaagctggaaacc
tacggcgatcagatcatcgcgttgatcgcagaaatgcaggcctga
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