Herbaspirillum frisingense: G5S34_03195
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Entry
G5S34_03195 CDS
T06761
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr03030
DNA replication
hfr03430
Mismatch repair
hfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5S34_03195
03430 Mismatch repair
G5S34_03195
03440 Homologous recombination
G5S34_03195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfr03032
]
G5S34_03195
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_03195
Enzymes [BR:
hfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5S34_03195
DNA replication proteins [BR:
hfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5S34_03195
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5S34_03195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QNB05880
LinkDB
All DBs
Position
complement(692829..693848)
Genome browser
AA seq
339 aa
AA seq
DB search
MQLRHDSLDAHLGKSLAPLYVIASDEHLLALEAADKIRRSARANGYTEREVLVVERSFKW
GELLAANQSQSLFGDKKLIELRIPTGKPGKDGGQALQDYAANLSPDNLTIISLPKLDWAT
QKAAWVGALQQAAVYIDIPLVERAQLPGWIGNRLAAQQQSADRPCLDFIADRVEGNLLAA
HQEIQKLALLYPPGKLGFEQVQDAVLNVARYDVFKLNEAMLSGDIARLTRMMDGLKGEGE
ALPLVLWAVTEEIRTLLKLKSGMAQGKPVGTLLKEYRIWGPRERLMEPALRRISLAALEQ
ALQEAALVDRMVKGLRARTFAGDPWDALLQLGLKLARGR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcgccacgactccctggacgcccatctcggcaaatcgctggcgccactctat
gtgatcgccagcgacgagcacctgctggcgctggaagcggccgacaagatccgccgcagc
gcccgcgccaatggctataccgagcgtgaagtgctggtggtggaacgcagcttcaagtgg
ggtgaactgctggcggccaaccagtcgcaatcgctgttcggtgacaagaagctgatcgaa
ctgcgcatccccaccggcaagcccggcaaggatggcggccaggccctgcaggattatgcc
gccaacctctcgcccgacaacctcaccatcatcagcctgcccaagctggactgggccacg
cagaaggcggcctgggtcggcgccctgcagcaggcggcggtgtacatcgacatcccgctg
gtggaacgcgcccagttgccgggctggatcggcaaccgcctggccgcccagcagcagagc
gccgaccgtccctgcctggacttcatcgccgaccgcgtggagggcaacctgctggccgcg
caccaggaaatccagaagctggccctgctctacccgcccggcaagctcggtttcgaacag
gtgcaggacgccgtgctcaatgtggcccgctacgatgtcttcaagctcaacgaagccatg
ctctccggcgacatcgcccgtctcacccgcatgatggacggcctgaagggcgaaggcgag
gccctgccactggtcctgtgggccgtgaccgaggaaatccgcacgctcctcaagctcaag
tccggcatggcccagggcaagccggtaggcacgctgctcaaggaataccgcatctggggt
ccgcgcgaacgactgatggaaccggccctgcgccgcatcagcctggccgcgctggaacaa
gccctgcaggaagccgccctggtggaccgcatggtcaagggcctgcgcgcccgcaccttc
gccggcgacccgtgggacgccctgctgcaactgggactgaaactggcccgcgggcgctga
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