Herbaspirillum frisingense: G5S34_04085
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Entry
G5S34_04085 CDS
T06761
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hfr03009
]
G5S34_04085
Ribosome biogenesis [BR:
hfr03009
]
Prokaryotic type
ribosomal protein modification factors
G5S34_04085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QNB06034
LinkDB
All DBs
Position
complement(890458..892668)
Genome browser
AA seq
736 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCN
TRNISTENIRLSQNNIVNPENRYQQTFKIQVELPADISEADRRGILRSIERCTVKKVVQE
GPEFIIEEVENLDADAQSLLTLQPEAGASTRILGKDLPLEQTIANMSGLLAELGIKIEIA
SWRNIIPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYLERISNNHFYAGSYWGED
IANAEFVHYPDERWFKPGRGNKLPKDILDAYCLDIYNPDGELRASHLVDTNSGNAERGIC
SLPFVRQSDGEVVYFPSNLVENLFVSNGMSAGNTLPEAQVQCLSEIFERAVKREILEGEI
CLPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESNAVTEPNNFVEHFIDSSGIVSWRF
FSARSDYEFVEWDFSGQGENSNAEEAAALFGILEEMGKQAYVAVYDQLGATACRILVPGY
SEVYPVEDLIWDNTNKALLFRADILNLHRLDDDALAALLERLENNELDDYSDIATLIGIE
FDENTEWGQLTVLELKLLIHLALQQFEEAHDLVGAFLQYNDNSVERGLFYQALNVVLEVE
LDDALALEDYETNFRRMFGNERMDAAIGSVKGDVRFHGLTPTSMKLEGLDRHQRLLDSYR
KLHKARARFAQAAAAA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtcaacttcctcgacaagctgcgtcttgaagccaagttcgacgacttt
accgtcatcgccgaccagcccatccgctacaagggggatggctcggcgccgggtcccttc
gattacttcctggcgtcctcggccctgtgcgcggcgtacttcgtgaagctgtactgcaat
acgcgcaatatttccaccgagaatatccgcctgtcccagaacaacatcgtcaatccggaa
aaccgctaccagcagaccttcaagatccaggtcgagctgccggccgacatcagcgaggcc
gaccgccgcggcattctgcgctcgatcgagcgctgtaccgtcaagaaggtggtgcaggag
gggccggaattcatcatcgaggaagtcgagaacctggacgccgatgcccagtccctgctg
accctccagcccgaagccggcgccagcacccgcatcctgggcaaggacctgccgctggag
cagaccatcgccaacatgtcgggcctgctggccgaactgggcatcaagatcgagatcgcc
tcctggcgcaacatcattcccaatgtgtggtcgctgcatatccgcgacgcgcattcgccg
atgtgcttcaccaacggcaagggcgccaccaaggaaagcgcgctggcctcggccctgggc
gagtacctcgaacgcatcagcaacaaccacttctacgcaggttcctactggggcgaggac
atcgccaatgccgagttcgtgcactatccagacgagcgctggttcaagcccgggcgcggc
aacaagctgcccaaggacatcctcgatgcctactgcctggacatctacaaccccgatggc
gagctgcgcgcttcgcatctggtcgataccaattccggcaacgccgaacgcggcatctgc
tcgctgccgttcgtgcggcagtcggacggcgaggtggtgtatttcccttccaacctggtc
gaaaacctcttcgtcagcaatggcatgagtgccggcaataccttgcccgaagcccaggtg
cagtgcctgtcggagatattcgagcgcgcggtcaagcgtgaaatcctggaaggcgaaatc
tgcctgccggacgtcccccaggaagtgctggcgaagtaccccggcatcctggccggcatc
caggggctggaagagcaaggcttcccggtgctggtcaaggatgcctcgctgggcggcgtc
tatccggtgatgtgcgtgaccctgatgaacccgcgcaccggcggggtcttcgcctccttc
ggcgcccaccccagcttcgaggtagcgctggagcgcagcctgaccgaactgctgcaggga
cgcagcttcgaaggcctcaatgacctgccccagccgaccttcgagagcaacgccgtcacc
gagcccaacaacttcgtcgagcacttcatcgattcgtcgggcatcgtctcgtggcgcttc
ttcagtgccaggtcggactacgaatttgtggaatgggatttctccggccagggcgaaaac
tccaacgccgaggaagccgccgccctgttcggcatcctggaggagatgggcaagcaagcc
tacgtcgccgtgtatgaccaactgggcgccacggcctgccgcatcctggtgccgggctat
tccgaggtgtacccggtggaggacctgatctgggacaacaccaacaaggcgctcctgttc
cgcgccgatatcctgaacctgcatcgcctggacgatgacgccctggccgccctgcttgag
cgcctggagaacaacgagctggatgactactcggacatcgccaccctgatcggcatcgag
ttcgatgaaaacaccgagtggggccagttgaccgtgctcgaactgaagctgctgatccat
ctggccctgcagcagttcgaagaggcccatgacctggtcggcgccttcctgcaatacaac
gacaactcggtcgaacgcggtctgttctaccaggccctgaacgtcgtgctggaagtggaa
ctggacgatgcgctggcgctggaagactacgaaaccaacttccgtcgcatgttcggcaat
gagcgcatggatgcggccatcggatcggtgaagggggatgtgcgcttccacggcctgacg
cccaccagcatgaagctcgaaggcctggaccgccatcagcgcctgctcgacagctatcgc
aagctgcacaaggcacgcgccaggttcgcgcaggctgccgctgcggcctga
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