Herbaspirillum frisingense: G5S34_04130
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Entry
G5S34_04130 CDS
T06761
Name
(GenBank) PAS domain S-box protein
KO
K11711
two-component system, LuxR family, sensor histidine kinase DctS [EC:
2.7.13.3
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5S34_04130
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hfr01001
]
G5S34_04130
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hfr02022
]
G5S34_04130
Enzymes [BR:
hfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
G5S34_04130
Protein kinases [BR:
hfr01001
]
Histidine kinases
LuxR family [OT]
G5S34_04130
Two-component system [BR:
hfr02022
]
LuxR family
DctS-DctR (C4-dicarboxylate transport)
G5S34_04130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_9
PAS_4
HisKA
PAS_8
PAS_3
dCache_1
ATPase
A9CJY8-like_N
Motif
Other DBs
NCBI-ProteinID:
QNB06042
LinkDB
All DBs
Position
complement(900292..902319)
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AA seq
675 aa
AA seq
DB search
MKTIPPPPISPQPNAASQLQASGRKTTMRWLIPFLLLCLFLATLIWLPRQAQQMEASERL
EQLIADSLWVEQAIRFQLSRDDESMRIIGREIITGRLHQDHFRSRLNALLRNNREFYRVT
WFNAEGRPVASTDDFPISRNDLSQSSLMTGDRARQMHRPLYSPPAVPPGIAEPMLMDYHV
PLFRDNHYVGSLVASYAVARILNEMVPWWFAQDNEISLTDTDDNVVARRTSGGPGLNVYT
HRRELELPGLTLVLHTNSTKSAPKLLPNLLVGSVIVLSLGLLWSLWALWRDITRRTKAEK
ALLNEAVFRAAMENSLVTGMRARDLEGRITYVNPAFCKMVGFAAEELVGKIPPMPYWAPE
AMDEYQERFSNVLAGRATPQFETIFQRRDGERFPVLIFESPLVDQDGKQTGWMGSILDIS
ERKRAEDLNRTQEEKLQASARLASMGEIASTLAHELNQPLAAISSFTTGALNMMQQGQAD
PKALQPALEKIHAQAQRAGHVIRSVHQFVKKREPARQRLQVRQLIDNVTPLIELQAQQFF
VVLQLQVPRSLPTILGDQVLLEQVILNLTRNGIQSMAAVPSARRILRVTAELTRNDDGVE
SVTVSVIDQGHGIAEDVAARLFSPFFSTKAEGMGMGLNICRTTIEFHGGTLTYTDNPAGG
TIFRFSLPAQSGQPQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatcccgcctccgccgatctcgccccagcccaatgccgcctcgcaattgcag
gcctcggggcgcaagaccaccatgcgctggctgattcccttcctgctgctgtgcctgttc
ctggccaccctgatctggttgccgcgccaggcccagcagatggaggccagcgaacggctg
gagcagttgatcgccgattcgctgtgggtggaacaggcgatccgtttccagttgagccgc
gacgatgaaagcatgcgcatcatcggacgcgagatcatcaccggccgcctgcatcaggac
cacttccgcagccgcctcaatgcgctgctgcgcaacaaccgcgagttctatcgcgtgacc
tggttcaatgccgaagggcggccggtggcctccaccgacgacttccccatcagtcgcaac
gatctctcgcagtcctcgctgatgaccggtgaccgcgcgcgccagatgcaccgcccgctc
tacagcccgcccgccgtgccaccggggatcgccgagccgatgctgatggactatcacgtg
cccctgttccgcgacaatcactacgtcggcagcctggtggccagctatgcggtggcgcgc
atcctcaatgaaatggtgccgtggtggttcgcccaggacaacgagatttcgctcaccgac
accgacgacaacgtggtcgcacgccgcacctcgggcggccccggcctgaatgtctacacc
catcgccgcgaactggaactgccgggcctgaccctggtgctgcacaccaacagcaccaag
agcgcgcccaagctcttgcccaacctgctggtggggtccgtgatcgtgctctcgctgggc
ctgctgtggagcctgtgggcgctgtggcgggacatcacccgccgcaccaaggccgagaag
gccctgctgaacgaggcggtgtttcgcgccgcgatggaaaactcgctggtcaccggcatg
cgcgcacgcgacctggaggggcgcatcacctatgtcaatccggccttctgcaagatggtc
ggcttcgccgccgaagaactggtgggcaagatcccgcccatgccctactgggcgccggaa
gccatggacgaataccaggagcgtttctccaacgtcctggccggacgcgccacaccgcag
ttcgagaccatcttccagcgccgcgacggagaacgcttcccggtgctgatcttcgagtct
ccgctggtggaccaggacggcaagcagaccggctggatgggctccatcctcgacatctcc
gaacgcaagcgcgccgaagacctgaaccgcacccaggaagagaaactgcaggccagcgcc
cgcctggccagcatgggcgagatcgcctccaccctggcgcatgaactgaaccagccactg
gcggccatctccagcttcaccaccggggcgctgaacatgatgcagcagggccaggccgac
cccaaggcgctgcagccggcgctggaaaagatccacgcccaggcgcagcgcgccggccac
gtgatccgcagcgtgcaccagttcgtcaagaagcgcgaaccggcgcgccagcgcctgcag
gtgaggcagctgatcgacaacgtgacaccgctgatcgaactgcaggcccagcagttcttc
gtggtgttgcagttgcaggtgccccgctccctgccgactatcctgggcgaccaggtactg
ctggaacaggtaatcctgaacctgacccgcaacggcatccagtccatggccgccgtgccc
tcggcacgccgcatcctgcgcgtgacggccgagctgacccgcaacgacgatggtgtggaa
tcggtcaccgtctcggtgatcgaccagggccacggcattgccgaggacgtggcggcgcgc
ctgttctcgcccttcttctcgaccaaggccgagggcatgggcatgggcctcaacatctgt
cgcaccaccatcgaattccacggcgggacgctgacttacaccgataacccggcaggcggt
acaatcttccggttttcgctgcccgcccagagcggccagccacaataa
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