Herbaspirillum frisingense: G5S34_05235
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Entry
G5S34_05235 CDS
T06761
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr02010
ABC transporters
hfr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G5S34_05235
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
G5S34_05235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hfr02000
]
G5S34_05235
Transporters [BR:
hfr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
G5S34_05235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Lipid_DES
Motif
Other DBs
NCBI-ProteinID:
QNB06231
LinkDB
All DBs
Position
1153399..1154337
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AA seq
312 aa
AA seq
DB search
MFKKQLLGAALGLAFAVGGSAAQAQEVYVPLISKGFQHQFWQAVKAGADQAGKDLKVKVT
FEGPETEAMVDKQIDMLSAALAKKPQAIGFAALDSKAAIPLLKKAQAAKIPVVAFDSGVD
SDIPVTTATTDNRAAAALAADKMAELVGKEGEVAVVAHDQTSRTGIDRRDGFLERIKANY
PKIKVVSVQYGAGDQLKSTEVTKSILQAYPKIKGIFGTNEGSAIGVVNGVKEMKRKIVII
GYDSGKQQKDAIREGVMAGAITQNPVGIGYKTVEAAVKAIKGEKLPKVIDTGFYWYDKSN
IDDAKIAAVLYD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaagaaacaactactgggcgctgccctgggcctggccttcgctgtcggcggttcg
gccgcgcaggcgcaggaagtgtatgtgccgctcatttccaagggcttccagcaccagttc
tggcaggccgtgaaggccggcgccgaccaggccggcaaggacctgaaggtgaaggtcacc
ttcgaaggtcccgagaccgaagccatggtcgacaagcagatcgacatgctctccgccgcg
ctggccaagaagccgcaggccatcggttttgccgccctggacagcaaggccgccatcccg
ctgctgaagaaggcgcaggccgccaagatcccggtggtggccttcgactcgggcgtggat
agcgacatcccggttaccaccgccaccaccgacaaccgtgctgccgccgcgctggcggcc
gacaagatggccgagctggtcggcaaggaaggcgaagtggccgtggtcgcccacgaccag
accagtcgcaccggcatcgaccgtcgcgacggcttcctggaacgcatcaaggccaactat
cccaagatcaaggtggtcagcgtgcaatatggcgccggcgaccagttgaagtccaccgag
gtcaccaagtccatcctgcaggcctatcccaagatcaagggcatcttcggtaccaacgaa
ggttcggccatcggcgtggtcaatggcgtgaaggaaatgaagcgcaagatcgtcatcatc
ggctatgactccggcaagcagcagaaggatgcgatccgcgaaggcgtgatggccggcgcc
atcacccagaacccggtgggtatcggctacaagaccgtggaagcggcggtcaaggcgatc
aagggcgagaagctgcccaaggtcatcgataccggcttctactggtacgacaagagcaac
atcgacgacgccaagatcgcggccgtgctgtacgactga
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