Herbaspirillum frisingense: G5S34_05395
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Entry
G5S34_05395 CDS
T06761
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5S34_05395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hfr02000
]
G5S34_05395
Transporters [BR:
hfr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G5S34_05395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QNB06257
LinkDB
All DBs
Position
complement(1188284..1189327)
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AA seq
347 aa
AA seq
DB search
MKRLTPALLSPLALGLLLSGAASAAELTLVNFGGANGNAQKVAYVEPFQKSTGTKVVTAE
FNGELAKVKAMVETRKVSWDVVEIDGGDLNRACDDGLIEKLDLAKTIKKDDYIPEATVSE
CGMGAFVWSTVLAYNADKLKTAPTGWADFWDTKKYPGKRGMKKSAQYNLEFALMADGVPT
KDVYKVLATKEGVDRAFKKLDQLKPNIQWWDAGALPAQFLASGDVVMANAYNGRIDAAQR
EGKNLKVVWTGSVYTLDYWVIPKGSPNKALAEKFISFASQPENQKVYANNIAYGPVNKGA
LKLLDAKTLGNLPTSPANAKDAVQLSLQFWTDHGEELEQRFAAWIAK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgacacctgccctgctgtccccgctcgccctgggcctgctgctttccggc
gcggcctctgccgctgaactgaccctggtcaacttcggcggcgccaatggcaacgcgcag
aaggtcgcctacgtcgaacccttccagaagagcaccggcaccaaggtcgtgactgccgaa
ttcaacggtgaactggccaaggtcaaggccatggtcgaaaccaggaaggtcagctgggac
gtggtggaaatcgatggcggcgacctgaaccgcgcctgtgacgacggcctgatcgaaaag
ctggacctggccaagaccatcaagaaggacgactacatccccgaagccaccgtcagcgaa
tgcggcatgggcgccttcgtctggtccaccgtgctggcctacaacgccgacaagctcaag
accgcaccgaccggctgggccgatttctgggacaccaagaaataccccggcaagcgcggc
atgaagaagagcgcccagtacaacctggagttcgccctgatggccgacggcgtgccgacc
aaggacgtctacaaggtgctggccaccaaggaaggcgtggaccgcgccttcaagaagctg
gaccagctgaaacccaacatccagtggtgggatgcgggcgccctgccggcacagttcctg
gcctcgggtgacgtggtcatggccaacgcctacaacggccgcatcgatgccgcccagcgc
gaaggcaagaacctcaaggtggtctggaccggcagcgtctataccctggactactgggtg
atccccaagggttcgccgaacaaggccctggccgagaagttcatcagcttcgccagccag
cccgagaaccagaaggtctatgccaacaacatcgcctacggccccgtcaacaagggcgcc
ctgaagctgctggacgccaagaccctgggcaacctgccgacctcgccggctaatgccaag
gacgccgtgcaactgagcctgcagttctggaccgaccacggcgaagagctggaacaacgc
ttcgccgcctggatcgcgaagtaa
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