Herbaspirillum frisingense: G5S34_05825
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Entry
G5S34_05825 CDS
T06761
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5S34_05825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hfr02000
]
G5S34_05825
Transporters [BR:
hfr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G5S34_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
PBP_like_2
PTH2
DUF7386
Dicers_N
Motif
Other DBs
NCBI-ProteinID:
QNB06331
LinkDB
All DBs
Position
1291105..1292133
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AA seq
342 aa
AA seq
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MRKHVVVMSSLAMLASITAHAADTMYVAGFGGSVEAAFRDKIIPAFEAKAGIKVVYVPGN
STDTLAKLQAQKGKQEISVAIIDDAPMSVAVDAGLCEKLEEGSNSKNVYPSARRPGGQAI
GLGYGATGLVYNTQVFAKNGWAPPTSWKDLEDKRYAGKMVIPPISNGFGLLALIMEARLN
GGSENNIDPGFAVMKRIAPGVLSWEPSPGKMAEMLQTGEAAVGVWGNGRVRTLVAQGAPV
KFVYPKEGALVILSEVCPVKGAPQPQQAQAFIQHLLSPEMQAIFTEATGLGPVNKETKLA
PALAADVVYGPDNVARLVKTDTKVINANRAAWTARWNREVER
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacatgttgttgtcatgagctctctggcgatgctcgcctcgatcaccgcccac
gcggccgataccatgtacgttgccggcttcggtggttccgtggaagctgccttccgcgac
aagatcattccggcgttcgaagccaaggctggaatcaaggtggtctatgtcccgggcaat
tccaccgataccttggccaagctgcaggcacagaagggcaagcaagagatctcggtggcc
atcatcgatgatgcgcccatgagcgtggcggtggatgccggactttgcgaaaagctggaa
gagggcagcaactccaagaacgtctatcccagcgcgcggcgtccgggtgggcaggctatc
gggctgggctacggtgccaccggactggtctataacacccaggtctttgccaagaatggt
tgggcgccgccgacctcctggaaagacctggaagacaagcgttatgccggcaagatggtg
atcccgcccatcagcaatggcttcggcttgctggccctgatcatggaggctcgcctgaac
ggcggcagcgaaaacaatatcgaccccgggttcgcggtcatgaagcgcatcgccccgggc
gtcttgtcctgggagccgtcgccgggcaagatggctgaaatgctgcagaccggcgaagcc
gcagtaggcgtctggggcaatggccgggttcgcacgctggtagcccaaggtgcaccggtg
aagttcgtctatcccaaggagggggctctggtgatcctcagcgaggtctgtccggtcaag
ggcgccccgcagccgcagcaggcgcaggccttcatccagcatctgctgagcccggagatg
caggcgatcttcaccgaagccaccggcctgggccctgtcaacaaggaaaccaagctggca
ccggccctggcggccgatgtggtctacggaccggacaacgtggcgcggctggtgaagacc
gataccaaggtcatcaatgcgaaccgcgccgcctggacggcgcgctggaatcgtgaagta
gagcgctga
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