Herbaspirillum frisingense: G5S34_05900
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Entry
G5S34_05900 CDS
T06761
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hfr03000
]
G5S34_05900
Transcription factors [BR:
hfr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
G5S34_05900
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
Peripla_BP_6
KR
Motif
Other DBs
NCBI-ProteinID:
QNB06342
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Position
1308512..1309624
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AA seq
370 aa
AA seq
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MSENRTTSPDAPLSLATRGTDDDGPEPRRRGPRKSAGGITLRDVAQLAGVAPITASRALN
TPSAVSPKVLQKVREAVEKTGYVPNLLAGGLASNKSRLVAVVVPTVIGPVFQEIVHTLTE
TLAAAGYQVMLGQSGYENSREDALLEAIIGRRPDGVVLTGIMRSAEARKRLLASGIPVVE
TWDLTPTPIDMLVGFSHEAIGREVARYLHQRGRKKVAVVGGRDERSQRRMQSFAQEAVAL
GMNDGQGAAALPMYHVIAPTTLGQGRRGLADLLQQQPDTDAIFCSSDLLALGVMIEAQSR
GIAIPGQLAVVGFGDLEFSRDLQPRLTTVRIDGTGIGQRAARFIIDRAAGIEVAERIVDV
GFSIIQRESA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacagaaccacctcccctgacgcccccctcagccttgccacgcgcggaacc
gacgacgatggtcccgaaccgcgtcgtcgcggcccgcgcaagagcgccggtggcatcacg
ctgcgcgacgtggcgcagctggccggggtggcgccgatcacggcgtcacgggccttgaac
acaccctcggcggtttcgcccaaggtcttgcagaaagtgcgcgaggcggtggaaaagact
ggctacgtccccaacctgctggccggcgggctggcctccaacaagagccggctggtggcg
gtggtggtgcccaccgtgatcgggccggtgttccaggaaatcgtccataccctgaccgaa
accctggccgccgccggctaccaggtcatgctgggccagagcggctacgagaattcgcgt
gaggatgcgctgctggaagccatcatcggccgccgtcccgatggcgtggtgctgaccggc
atcatgcgctcggccgaggccaggaagcggctgctggccagcggtatcccggtggtcgag
acctgggacctgacgcccacgccgatcgacatgctggtcggtttttcgcacgaggccatc
ggccgcgaagtggcgcgctacctgcaccagcgcggtcgcaagaaggtcgcggtggtgggc
gggcgcgacgagcgcagccagcgccgcatgcagtccttcgcgcaggaagcggtggcgctg
ggcatgaacgacgggcagggggcggcagccctgccgatgtaccacgtcatcgccccgacc
accctggggcagggacggcggggtctggccgatctgttgcagcaacagcccgacaccgat
gccatcttctgcagttccgacctgctggcgctgggcgtgatgatcgaggcccagagccgt
ggcatcgccattcccggacaactggcggtggtcggcttcggcgacctggaattctcgcgt
gacctgcaaccccgcctgaccaccgtgcgcatcgacggcaccggcatcggccagcgcgcg
gcgcgtttcatcatcgaccgggcggcgggcatcgaggtggccgagcgcattgtcgatgtc
ggcttttccatcatccagcgcgaaagcgcctga
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