Herbaspirillum frisingense: G5S34_06005
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Entry
G5S34_06005 CDS
T06761
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hfr03019
]
G5S34_06005
03016 Transfer RNA biogenesis [BR:
hfr03016
]
G5S34_06005
Enzymes [BR:
hfr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
G5S34_06005
Messenger RNA biogenesis [BR:
hfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G5S34_06005
Transfer RNA biogenesis [BR:
hfr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
G5S34_06005
Prokaryotic type
G5S34_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
ATP-sulfurylase
Motif
Other DBs
NCBI-ProteinID:
QNB06361
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All DBs
Position
1330614..1331009
Genome browser
AA seq
131 aa
AA seq
DB search
MRARFISSIFMKYWLVLLTALMLAAPVHARGPEPGGLPEVNLDQLPREAQQTMALIREGG
PFPYEKDGAVFGNYEGVLPRQKRGYYREYTVKTPRARNRGARRIISGGDPKSSGEYYYTS
DHYKSFRRIRD
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctcgattcatctcctcgatattcatgaagtactggctggtgctgctcaccgcc
ctgatgctggccgcgcctgtgcatgcacgtggcccggagccgggcggcctgcccgaggtg
aacctcgaccagctgccgcgcgaggcccagcagaccatggccctgatccgcgagggcggg
cctttcccgtatgaaaaggacggtgccgtcttcggcaattacgaaggggttttacccagg
cagaagcgcgggtattatcgcgaatacactgtcaagacgccgcgcgcccgcaaccggggc
gcccgacgcatcatcagtggcggggatcccaagtcttccggcgaatactattacacgagc
gatcactacaagagcttccgccggatccgcgattga
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