Herbaspirillum frisingense: G5S34_06020
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Entry
G5S34_06020 CDS
T06761
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hfr03009
]
G5S34_06020
Enzymes [BR:
hfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
G5S34_06020
Ribosome biogenesis [BR:
hfr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
G5S34_06020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Ubie_methyltran
Methyltransf_31
Methyltransf_25
MTS
Methyltr_RsmF_N
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_33
Methyltransf_12
FtsJ
GCD14
Motif
Other DBs
NCBI-ProteinID:
QNB06364
LinkDB
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Position
1332330..1333589
Genome browser
AA seq
419 aa
AA seq
DB search
MRLPPAIIPHTEELLREVLRFTGPADVTLSRYFRDNPRLGSRERGVIAEAVYGLLRNKTV
LTNFAESGIGPMMRRLALLGLADAVGAESIAGLQEGEAEWLERVAQIDRTQLAPQMRSNL
PPWLWDKLVARMGEAATLELADAMNRPAPLDLRVNTIKSDRDTVIAELAKAPVACEPTPY
SPLGLRVFKKPALQNIPVFKEGAIEVQDEGSQLLAQIVGAKRGEMVVDFCAGAGGKTLAL
GALMRNTGRLYAFDVSEKRLAKLKPRLARSGLSNVHPVVIAHENDAKVKRLAGKLDRVLV
DAPCSGLGTLRRNPDMKWRQSVETLGEMRAKQGSILASAARLVRPGGRLVYGTCSILEEE
NDEVIADFLQSHPDFILRPMSEVLAEQKIALDMGDYLKLLPHLHQTDGFFAAVLERRAA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagattgcctcccgcgatcattccccataccgaagaactgctgcgcgaagtgctgcgc
ttcaccggccccgccgacgtgacgctgtcgcgttatttccgcgacaacccgcgtctgggc
agccgcgaacgcggcgtcatcgccgaggccgtctatggcctgctgcgcaacaagacggtg
ctgaccaacttcgccgaatccggcatcggtccgatgatgcgccgcctggccctgctgggc
ctggccgatgctgtcggtgccgaatccatcgccggcctgcaggaaggcgaggccgaatgg
ctggagcgtgtggcccagatcgatcgtacccagctggcgccgcagatgcgcagcaacctg
ccgccctggctgtgggacaagctggtggcccgcatgggcgaggcggccaccctggaactg
gccgacgccatgaaccgcccggccccgctggacctgcgcgtgaacaccatcaagtcggac
cgcgacaccgtcatcgccgaactggccaaggccccggtggcctgtgagccgaccccgtat
tcgccgctgggcctgcgcgtgttcaagaaaccggcgctgcagaacatcccggtgttcaag
gaaggcgccatcgaagtacaggatgaaggcagccagttgctggcccagatcgtcggcgcc
aagcgcggtgagatggtggtcgatttctgtgccggcgccggtggcaagaccctggccctg
ggtgcgctgatgcgcaataccggtcgcctgtatgccttcgacgtgtccgaaaagcgcctg
gccaagctcaagccgcgcctggcgcgcagtggcctgtccaacgtgcacccggtggtgatc
gcccacgagaacgacgccaaggtcaagcgcctggccggcaagctcgatcgcgtgctggtc
gatgcgccctgcagcggcctgggcaccctgcgtcgcaaccccgacatgaaatggcgccag
tccgtggaaaccctgggcgagatgcgcgccaagcagggctccatcctggccagcgcggcc
cgcctggtgcgcccgggcggtcgcctggtgtatggcacctgcagcatcctggaagaagag
aacgacgaagtcatcgccgatttcctgcagtcgcacccggatttcatcctgcgtccgatg
agcgaggtcctggccgagcagaagattgcgctggacatgggcgactacctgaagttgctg
ccgcacctgcatcagaccgatggcttcttcgcggccgtgctggagcgccgcgcggcatga
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