Herbaspirillum frisingense: G5S34_06270
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Entry
G5S34_06270 CDS
T06761
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00260
Glycine, serine and threonine metabolism
hfr00460
Cyanoamino acid metabolism
hfr00630
Glyoxylate and dicarboxylate metabolism
hfr00670
One carbon pool by folate
hfr00680
Methane metabolism
hfr01100
Metabolic pathways
hfr01110
Biosynthesis of secondary metabolites
hfr01120
Microbial metabolism in diverse environments
hfr01200
Carbon metabolism
hfr01230
Biosynthesis of amino acids
hfr01240
Biosynthesis of cofactors
hfr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5S34_06270
09102 Energy metabolism
00680 Methane metabolism
G5S34_06270
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5S34_06270
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G5S34_06270
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G5S34_06270
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G5S34_06270
Enzymes [BR:
hfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G5S34_06270
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
OKR_DC_1
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
QNB06406
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Position
1373318..1374562
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AA seq
414 aa
AA seq
DB search
MFDKNQTLAKVDPDLWSAIQKENARQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMEALAREKKPKLIIAGASAYSLR
IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL
MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI
KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR
LGSPAMTTRGFKEAEAEKVGNLIADVLDNPHDAATIERVKVEVKKLTDAFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaagaaccagactctcgcgaaagtcgatcccgacctgtggtctgccatccag
aaggaaaacgcacgccagcaggatcacatcgagctgatcgcttctgaaaactacacctcg
ccggccgtcatggaagcgcaaggttcgcaactgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggctgcgaatacgtggacgtggccgaacagctggccatcgac
cgcttgaaggccctgttcggcgccgaagccgccaacgtgcaacccaactccggttcccag
gccaaccagggcgtgttcttcgccatgttgaagccgggcgacaccatcatgggcatgtcg
ctggcagaaggcggccacctgacccacggcatggcactgaacatgtcgggcaagtggttc
aacgtggtctcctacggcctgaacgacaaggaagagatcgactacgacgccatggaagcc
ctggcccgcgagaagaagcccaagctgatcatcgctggcgcctcggcctactcgctgcgc
atcgacttcgagcgcttcgccaagatcgccaaggaagtcggcgcctacttcatggtcgac
atggcccactatgccggcctgatcgccgccggtgtgtaccccaacccggtgcccttcgcc
gacttcgtcacctcgaccacccacaagtccctgcgcggtccgcgcggtggcgtgatcctg
atgaaggccgagcatgagaaggccatcaactcggccatcttccccggtatccagggcggt
ccgctgatgcacgtcatcgccgccaaggcggtggccttcaaggaagccgcctcgccggaa
ttcaaggcctaccagcagcaggtggtcaagaacgccgatgtgctggccaagaccctgatc
aagcgtggcctgcgcatcgtctccggcggtaccgagtcgcacgtgatgctggtggacctg
cgtcccaagggcctgaccggcaaggaagccgaagccatcctgggttcggcccacatgacc
tgcaataagaacggcatccccaacgatccggaaaagccgttcgtgacctcgggcatccgc
ctgggcagcccggccatgaccacccgtggtttcaaggaagccgaggccgagaaggtcggc
aacctgatcgccgacgtgctggacaacccgcatgacgcggccaccatcgagcgcgtcaag
gtcgaggtcaagaagctgaccgacgccttcccggtctacggctga
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