Herbaspirillum frisingense: G5S34_06500
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Entry
G5S34_06500 CDS
T06761
Name
(GenBank) DUF4347 domain-containing protein
KO
K20276
large repetitive protein
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5S34_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
DUF4347
Big_12
Big_6
Big_3_3
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
QNB06446
LinkDB
All DBs
Position
1429556..1436125
Genome browser
AA seq
2189 aa
AA seq
DB search
MNDIHFPFRLMHQLRASDIAPSAPSRPTLRRASRLLSLEQRFMFDGAAVATAADAAHAQP
DPHAAAMVAEAAAAVHQVREVDPARNDGKKEVAFVDTSVANYKMLEAGIRAGVEIVEIDG
SRSGLAQIAAWAASHEGYDAVHILSHGAAGKVYLGSDTLSAATLGDTGVQAELAQLGHAL
KAGGDLLIYGCDVAASDSGQHLIAGLAAATGADVAASDDPTGTQSMGGDWVLEKSVGAIE
TRIAVTDEVVLNYHSVLANATLTFESGTGFFSNVGSTAMSFTEASTGVTFTFTAQTAGGG
ADHVQLGSNYGASYHGAEDVYFGVDDIDASATMTIQNGKAFTLNSLYLSNQGSNDDRFVI
TTNKGGSYVSNLLPSGVNSFQVILPGTDDFKGITWFKITPQSGASYMEIDDIALTNIVDL
PTVTDARISISSTGSGPGGVYRIGDTVTAQWNNTASGDNNTGIVGVKMDFSQFGGGNAVT
ATETSPGSGIWTASYVITAGSIDATGRNVSVTADNGATTTTADSTNLSVDNAAPVVTDGR
ISISGGSGTGGAYKIGDTVTATWNNSSGGDNNGDITGVTVDFSAFGGGSTVAASNSGGTW
TATYTITAGSIDLTNRNISVTATDNAGNTKTTADTTNATVDNIAPTVSDAQISISGGSGT
GGAYRIGDTVTATWNASGDGNTDTLTGVTVNFSQFGGGSVAATNSGGIWTATYTIVAGAI
NGLSARNITVTATDNAGNTTTTSDTTNATVDNQRPTTTIGGLALNPDTGSSSTDFVTNTA
AQTITGTLSAGLTGGEQVYGSLDNGSTWVNITSKVSGTTLTWNGVTLAGSSTLKLKVTDA
AGNDGTTASQAYTLDTTAPAAPSVPDMTSGTDTGASSTDNITKNTTPVFTGTAESGATVT
LYDSDGTTVLGTTTATGGVWSITASALAAGSHSLTAKATDVAGNTSAASSPLVVTIDTTA
PTGLGLSSSTISSLSAGSGSAIATLSSTDALAVTYSLVAGNGTNDANNGSFSISGNTLQV
GGASLSAGTYKLYVAATDAAGNVANQAFTLTVVDAPSISSIVRSGGASSTVGNAAASISY
TVTFSEAVTGVDAGDFTLSASGTAGGSIASVTGSGTTYTVMVNALTGDGTLRLDLNGSGT
GIRNGGSVDIVGGYTSGASYTLDHTAPAAPSTPDMTAATDTGISNADNITRNTTPVFTGT
AESGTTVTLYDTDGSTVLGTTTATGGSWSITSSTLSAGAHTITAKATDAAGNTSAASSGL
NVVIDTTAPTLSISSNVASLKAGDTATITFTFSEDPGATFTWSGSSGDVVVSGGTLSAIS
GSGLTRTAIFTPTAGVNSGTASISVTGGSYTDAAGNSGGGGLSPSLTFDTLAPAAPSTPD
MSAGTDSGSSSTDNITSNTAPVFTGTAESGSTVTLYDTDGTTVLGTAIATGGNWSITSAA
LSEGAHTITAKATDAAGNSSTVSSGLSVTIDTSAPIQTVATVGLSSDTGSSGSDFVTRTA
AQTISGTLSANLGSDEIVQISLDNGATWQVATASAGSNTWSYNTTLSGSDTLKVRVVDAA
GNIGAVHSQAYVLDTTAPDVNSVSVPANGFYYTNQNLDFTVHFSEAVTIDTTGGTPRIAL
VIGATTVYATYQSGSGTSDLVFRYVIADGDQDFNGITVGALNTNGGSMRDAAGNDATLTM
NSVGSTASVNVDGTVPRIVDVSASTVDGGYKAGDTVSLTVTFNHAVTVDTTGGTPSLALN
SGGSASYTSGSGGTTLVFTYIVGAGQNTVDLDYNSTAALALNGGTIKSGSGGHPDALITL
LAPGASGSLGANKAIVIDTTPPAAPTVESVNTSSQAPVLSGDATLEAGGSLTITVGGATY
HVIPSGGHWSLDLASASPASGSLGQLVLGQTYNVTATVTDAVGNINSASGVLALAAPESP
ASPQSPTPGNPTVQVPPPRPVLTSVNPAPPVSGAAAVASVSTGEASPLAPVITPFAPPAL
ESTLWNASMSNGTGLISASLFSLARSTAAFDGQGNGDRFSQTSLTQGSGFHVVVLPASAN
ADGLVLNRGIGDQALQASGHTEFSIPPDAFAHTDPNAAIQLSARQPDGRPLPNWVRFDAR
NGKFIIDAPGGMNGDIAVKVTARDARGQEVTTIFRIRVSDRLAQSHPHTEHQGRTGLSEQ
LHLAAHQRSQASALGPLAQLANALQWPNS
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatccattttccctttcgcttgatgcaccaactgcgggcttcggacatcgcg
ccatcggcgccatcacgaccgaccctgcgccgcgcttcgcgcctgctgtcgctggagcag
cgcttcatgttcgacggcgctgccgtggccacggcagccgatgccgcccatgcccagccc
gacccccatgctgccgcgatggtggccgaagctgccgctgccgtgcatcaggtgcgggaa
gtcgacccggctcgcaacgatggcaaaaaggaagtcgccttcgtcgatacgtcggtagcc
aactacaagatgctggaagccggcatccgcgccggtgtcgagatcgtcgagatcgatggc
agccgcagcgggctggcgcagatcgctgcgtgggcagcctcgcatgagggctacgacgcg
gtgcacatcctttcccacggcgcggccggcaaggtctatctcgggtccgacacgctctcg
gccgccaccctcggtgacaccggcgtacaggccgaactcgcgcagctcggtcacgcactc
aaggccggtggtgacttgttgatctacggttgcgacgtggcggccagcgacagtgggcaa
cacctgatcgccgggctggctgcggccaccggcgccgatgtcgccgcctcggacgatccg
accggcacgcagtcgatgggcggcgactgggtgctggaaaagagtgtgggcgccatcgaa
accaggatcgccgtcaccgatgaggtcgtcctcaactatcactcggtgctggccaatgcc
accctgaccttcgagagcggaaccggattcttttccaacgtgggctcgacggccatgtcc
tttacggaagccagcacaggggtgaccttcacctttaccgcccagacggcaggcggcggc
gcggaccacgtgcagctgggcagcaattacggcgcctcataccatggtgccgaggatgtc
tatttcggcgtggatgacattgatgcctcggccaccatgaccattcagaacggcaaggca
tttacgctcaattcgctctacctgagcaaccagggatccaatgatgaccgtttcgtcatc
accacgaacaagggtggttcctacgtcagcaatcttcttccttcgggggtcaattccttt
caggtcatcttgcccggcacggacgacttcaagggcatcacctggttcaagatcacgccg
caatcgggtgcctcctatatggagatcgacgatatcgccttgaccaatatcgtcgatctg
ccgacggtgaccgatgccaggatttccatttcctccacgggctccggcccaggtggcgtc
tacaggatcggcgataccgtcaccgcacaatggaacaacaccgccagcggcgacaacaac
accggcatcgtcggcgtgaagatggatttcagccagtttggcggcggcaacgcggtcacg
gccactgaaaccagccccggcagcggaatctggaccgccagctatgtcatcactgccggc
tcgatcgacgcgaccggcagaaacgtctcggtgacggccgacaacggtgccaccacgacc
accgccgacagcaccaacctctccgtggacaacgctgcaccggtggtgacggacgggcgc
atcagcatcagcggcggcagcggtacgggtggcgcctacaagatcggcgacacggtcacg
gcgacctggaacaacagcagtggcggcgacaacaacggcgacatcaccggcgtcaccgtc
gatttcagcgcctttggtggcggttcgacggtggcagccagcaactccggcggcacctgg
acggccacctataccatcactgcgggttccatcgacctgaccaacaggaacatctcggta
accgcgaccgataacgccggcaataccaagaccacggccgataccaccaatgccaccgtc
gacaatattgcgccgaccgtatccgatgcccagatcagcatcagcggcggtagcggtacg
ggtggcgcctacaggatcggcgataccgtcaccgcgacctggaacgccagcggtgacggc
aataccgacacgctcaccggcgtcaccgtcaacttcagccagttcggtggcggatcggtg
gcggcgaccaattccggtggaatctggacggccacctataccattgtcgccggcgcgatc
aacggcctgagcgcgcgcaacatcaccgtgaccgccaccgacaatgcgggcaataccacc
accaccagcgatacgaccaacgccacggtagacaatcagcggcccaccaccaccatcggc
ggtctggccttgaatcctgacaccggttcaagcagcaccgacttcgtcaccaataccgcc
gcccagaccattaccggcacattgagcgcaggcctgaccggtggcgagcaggtgtatggg
tcgctggacaacggcagcacctgggtcaatatcaccagtaaagtctccggcaccacgctg
acctggaacggcgtgacgctggcgggcagcagcaccctcaagctcaaggtgacggatgcc
gccggcaacgatggcacgacggccagccaggcctacacgctggacaccaccgcgccggcc
gcgccctcggtaccggacatgaccagcggcaccgacaccggggcctccagcaccgacaac
atcaccaaaaacacgacgccggtctttaccggcacggccgaaagcggtgccacggtcacg
ctctacgatagcgacggcaccaccgtgctcggcacgacaacggccaccggtggcgtctgg
tcgatcaccgcatcggcgctcgccgctggcagccatagcctgacagccaaggccacggac
gtcgccggcaatacctcggcggcatcgtccccgctggtggtcaccatcgacaccaccgca
ccgaccggcctgggcttgagctccagcaccatctccagcctgagcgcgggcagcggctcg
gccattgcgaccctctcgtccaccgatgcactggcggtgacctacagtctggtcgcaggc
aacggcaccaatgatgccaacaacggcagtttcagcatttccggcaataccttgcaggtg
ggcggcgcctcgctgagtgcgggaacctacaagctttacgtcgctgccaccgatgccgcc
ggcaatgtggccaaccaggctttcaccctcacggtggtggatgcccccagcataagttcc
atcgtgcgtagtggcggcgcctcgtccaccgtgggcaatgcagccgcctccatcagctac
accgtcaccttcagtgaagccgtcaccggcgtggatgccggtgatttcaccttgagcgcg
agcggcacggcaggcgggagcattgccagtgtcacgggcagcggcacgacctataccgtc
atggtcaatgcgctgaccggtgacggcacattgcgcctggacctcaacggcagcgggacc
ggtatccgtaatggtggcagtgtcgacatcgtcggcggctacaccagcggcgccagctac
acgctggaccatacagcaccggctgcgccctccacgccagacatgaccgccgccaccgac
accggcatctccaacgccgacaacatcacccggaataccacgccggtcttcaccggcacg
gccgaaagcggtaccacggtcacgctctacgataccgatggcagcaccgtgctgggcacg
accacggccaccggaggcagctggtccatcaccagttccaccctgagcgcaggcgcacac
acgatcacggccaaggccaccgatgccgccggcaacaccagtgccgcgtcctccggcctg
aacgtcgtcatcgacacgaccgcgcctaccctttccatcagcagcaatgtcgccagcctg
aaggcgggcgacaccgccaccatcacgttcaccttcagcgaggaccctggcgccaccttt
acctggagcggatcctccggcgacgtcgtggtcagtggtggcaccctgagcgctatctcc
ggttccggcctgacgcgcactgcaatcttcaccccgaccgccggcgtgaattccggcacg
gcaagcatttcggtgactggcggcagttataccgatgccgcgggcaacagcggtggcggc
ggcctgagtccatcgctgacgttcgataccctggcaccggcagcgccgtccacgcccgac
atgagcgccggcaccgatagcggcagttccagtactgacaacatcaccagcaataccgcg
cccgtgttcaccgggactgcggagagtggttccaccgtcacgctttacgacaccgacggc
acgaccgtactggggacggccatcgctaccggggggaactggtcgatcaccagtgcggcc
ctcagcgaaggcgcacatacgatcactgccaaagccaccgatgcggcgggaaacagcagc
accgtttcgtccggcttgagcgtcaccatcgatacgagcgcaccgatccagacggttgcc
actgtgggcctgtcttccgataccggatcttcgggcagtgacttcgtcacccggaccgct
gcccagaccatctcgggtaccttgagcgccaacctggggagcgatgagatcgttcagata
tcgctcgacaatggcgcaacctggcaagtcgccaccgcgtccgcaggtagcaatacatgg
tcgtacaacaccacgctgagcggtagcgatacgctcaaggtgcgggtcgtcgatgcggcc
ggcaatatcggtgccgtgcactcgcaggcgtatgtgctcgatacgacagcgcccgatgtc
aattcggtttccgtccccgccaacggcttctactacaccaaccagaacctggacttcacc
gtccacttctccgaggcggtgaccatcgataccaccggtggcacgccacgcatcgccctg
gtcatcggggccaccaccgtctacgcgacctatcagtccggttcgggaaccagcgatctg
gtattccgctacgtcattgccgatggcgatcaggatttcaatggcatcaccgttggcgcc
ttgaacaccaacggcggcagcatgagggatgccgcgggcaacgacgcgaccctgaccatg
aacagtgtcggcagcactgcctcggtgaatgtcgacggtacggtgccgcgcatcgtcgac
gtcagcgccagtacggtcgacggcggctacaaggcaggcgacaccgtcagcctcaccgtg
accttcaaccacgccgtcaccgtggatacgacgggcggtacgcccagccttgcgctcaac
agcggaggcagcgccagctacaccagcggatcaggcggcacgaccctggtctttacctat
atcgtcggcgcaggccagaataccgtcgacctcgattacaacagcaccgcggcgctggcc
ctcaatggcggcaccatcaagtccggcagcggcgggcatccggacgccctgatcacgttg
ctcgcgccgggcgcaagtggttcgctcggcgccaacaaggccattgtcatcgacaccacg
ccgccggcggcacccaccgtcgaatccgtcaataccagcagccaggcgccggtgctgagt
ggcgacgccacgctggaagccggcgggagcttgaccattaccgtcggtggtgccacctac
catgtcatccccagcggcggtcactggagtctcgatctggcatcggccagtccggccagc
ggcagcctcgggcagcttgtcctgggtcagacctataacgtcacggcgacggtgaccgat
gcggtcggcaacatcaacagtgccagcggcgtcctggcgctggcggcgccggagtcgcca
gcgtcgccgcagtcccctacgccgggcaacccgaccgtccaggtaccccctccgcggccg
gttctcacttctgtcaatccggcgcccccggtgagcggcgcggccgctgtcgcgagcgta
tccaccggcgaagcctcgccacttgcacctgtcatcaccccctttgcgcctcccgccctg
gagtccactctgtggaacgcctcaatgtcgaacgggacgggtctgatttcggcctccttg
ttctcgctggcgcgcagtaccgctgctttcgatggacagggcaatggcgatcgcttcagc
cagaccagcctgacgcagggcagcggcttccatgtcgtcgtgctgccggcatccgcgaat
gcggacggcctggtgctgaaccgcggcattggcgaccaggcccttcaagcgtcgggacat
accgaattcagcattccccccgatgcgtttgcgcataccgacccgaatgcggcgatccag
ctctctgcacgccagcctgacggccggcccttgccgaactgggtgcgtttcgacgccagg
aacggcaagttcatcatcgatgcgcctggcggcatgaacggcgacatcgcagtcaaggtc
accgcacgggacgcccgtggccaggaagtcacgacgatcttccgcatccgcgtgagcgac
cggctggcgcaatcgcatccgcacaccgagcatcagggacgcacaggcttgagcgagcaa
ctccacctggcggcacaccagcgtagccaggccagtgcacttgggccattggctcaactg
gccaacgcattgcaatggccgaattcctga
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