Herbaspirillum frisingense: G5S34_07265
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Entry
G5S34_07265 CDS
T06761
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00020
Citrate cycle (TCA cycle)
hfr00480
Glutathione metabolism
hfr00720
Other carbon fixation pathways
hfr01100
Metabolic pathways
hfr01110
Biosynthesis of secondary metabolites
hfr01120
Microbial metabolism in diverse environments
hfr01200
Carbon metabolism
hfr01210
2-Oxocarboxylic acid metabolism
hfr01230
Biosynthesis of amino acids
hfr04146
Peroxisome
Module
hfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hfr_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
G5S34_07265 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
G5S34_07265 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
G5S34_07265 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G5S34_07265 (icd)
Enzymes [BR:
hfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
G5S34_07265 (icd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
QNB06588
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All DBs
Position
1620128..1621384
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AA seq
418 aa
AA seq
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MSYQHIQVPAEGRKITANADDTLNVPNNPIIPFIMGDGVGVDVTPVMLKVVDAAVEKAYG
GARKIHWMEIYAGEKSTRLYGPDVWLPDETLDVLKEYLVSIKGPLSTPVGGGIRSLNVTM
RQQLDLYVCLRPVRYFKGVPSPLREPEKTDMVIFRENSEDIYAGIEWQAGTPEVKKLIDL
LTREMGVKKLRFPETSALGIKPVSREGTERLVRKAIQYAIDHDKPSVTLVHKGNIMKYTE
GAFRDWGYALAGREFGAELIDDGPWMRLKNPKTGRQIVIKDAITDAFFQQVLMRPAEYSV
IATMNLNGDYISDAVAAQVGGIGIAPGANMSDSVAVFEATHGTAPKYAGKDYVNPGSSIL
SAEMMLRHMGWIEAAELIVTAMQKSVSAKRVTYDFARLLEGATQVSCSGFGEAMIENM
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccaacatatccaagtgcctgctgaagggcgcaagatcaccgccaacgccgat
gacaccctcaatgtccccaataaccccatcatccccttcatcatgggcgatggcgtgggc
gtggatgtgacgccggtgatgctcaaggtggtcgatgccgccgtggaaaaggcctacggt
ggcgcgcgcaagatccactggatggaaatctacgccggcgaaaagtcgacccggttgtat
ggtcccgatgtctggctgccggatgagaccctggatgtgctcaaggaatacctggtctcg
atcaagggacccctgtccacaccggtcggcggcggtatccgctcgctcaacgtgaccatg
cgccagcagctggacctgtatgtctgcctgcgcccggtgcgttacttcaagggcgtgcct
tcgccgctgcgcgagccggagaagaccgacatggtgatcttccgcgagaactccgaggat
atctacgccggcatcgaatggcaggccggtacgccggaagtgaagaaactgatcgacctg
ctgacccgcgagatgggcgtcaagaagctgcgcttcccggagacctctgcgctgggcatc
aagccggtctcgcgcgaaggtaccgagcgcctagtgcgcaaggcgatccagtacgccatc
gatcacgacaagccctcggtcaccctcgtccacaagggcaatatcatgaaatacaccgaa
ggggccttccgtgactggggctatgccctggcgggccgcgaattcggtgccgagctgatc
gacgatggcccgtggatgcgcctgaagaatcccaagaccggtcgccagatcgtgatcaag
gatgcgatcaccgatgccttcttccagcaggtgctgatgcgcccggcggaatacagcgtc
attgccaccatgaacctgaacggggactacatctccgacgccgtggcggcccaggtcggc
ggcatcggcatcgcgccgggtgccaacatgtccgactccgtggccgtgttcgaagccacc
cacgggaccgcgcccaagtacgccggcaaggactacgtgaaccccggctccagcattctc
tcggcagaaatgatgctgcgccacatgggctggatcgaagcggccgaactgatcgtgacc
gcgatgcagaaatcggtctctgccaagcgcgtgacctatgatttcgcccgtctgctggaa
ggtgcgacccaggtttcgtgctccggcttcggcgaagcgatgatcgaaaacatgtaa
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