Herbaspirillum frisingense: G5S34_07530
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Entry
G5S34_07530 CDS
T06761
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
G5S34_07530 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hfr03019
]
G5S34_07530 (orn)
03009 Ribosome biogenesis [BR:
hfr03009
]
G5S34_07530 (orn)
Messenger RNA biogenesis [BR:
hfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G5S34_07530 (orn)
Ribosome biogenesis [BR:
hfr03009
]
Eukaryotic type
Pre-60S particles
RNases
G5S34_07530 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
QNB06633
LinkDB
All DBs
Position
1683399..1683968
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AA seq
189 aa
AA seq
DB search
MSQAPAAPVRPNEMNLIWVDMEMTGLDPDKDRIIEVAVVVTDAELNILGEGPVLAVHQSD
ELLDGMDAWNKGTHGRSGLIDRVKASTVTEADAEQQIIAFLKQYVPAGKSPMCGNSICQD
RRFMVRGMPKLEEFFHYRNLDVSTLKELCKRWKPEIATGFKKRQMHTALADILESIEELK
YYREHFIKE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagcccccgccgcgcccgtccggcccaatgaaatgaacctgatctgggtcgat
atggaaatgaccggactggacccggacaaggatcgcatcatcgaagtggccgtggtggtt
accgatgcagaactgaacatcctgggcgaaggcccggtgctggccgtccatcagtccgac
gagctgctggacggcatggatgcctggaacaagggaacccacggccgctcgggcctgatc
gaccgcgtcaaggcttccaccgtcaccgaagccgatgccgagcagcagatcatcgccttc
ctgaagcaatatgtcccggccggcaagtcgcccatgtgcggcaattcgatctgccaggat
cgccgcttcatggtgcgcggcatgcccaagctggaagaattcttccactatcgcaacctg
gatgtgtcgaccctgaaggaactgtgcaagcgctggaagccggaaatcgccaccggtttc
aagaagcgccagatgcatacggccctggccgatatcctggaatcgatcgaagagctcaag
tattaccgcgagcacttcatcaaggagtga
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