Herbaspirillum frisingense: G5S34_08200
Help
Entry
G5S34_08200 CDS
T06761
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00630
Glyoxylate and dicarboxylate metabolism
hfr00680
Methane metabolism
hfr01100
Metabolic pathways
hfr01120
Microbial metabolism in diverse environments
hfr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5S34_08200 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
G5S34_08200 (fdhF)
Enzymes [BR:
hfr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
G5S34_08200 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_6
Fer4_10
Fer4_Nqo3
Fer4_9
Fer4_15
Fer4_16
Fer4_2
Fer4_8
Fer4_NDSU1
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
QNB06750
LinkDB
All DBs
Position
1832420..1835305
Genome browser
AA seq
961 aa
AA seq
DB search
MNQLNETDYGTPARVSENMVTLEIDGVAVTVPAGTSVMRASVEAGINVPKLCATDSLEPF
GSCRLCLVEIEKDGRKMKGYPASCTTPCEPGMKVQTQTPKLAEIRRGVMELYISDHPLDC
LTCPTNGNCELQDMAGVVGLREVRYGYEGENHLKLKKDESNPYFTYDASKCIVCNRCVRA
CEETQGTFALTINGRGFESRVSAGQMESFMESECVSCGACVEACPTATLTEKTVIMLGQA
EHSAVTTCAYCGVGCSFKVEMKGNEVVRMVPYKDGKANQGHSCVKGRFAWGYATHKDRIL
NPMIRKSINDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQKLV
RAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFESVMKSDVILIMGANPASGHPVF
ASQIKRRVRQGAKLIVIDPRTTEMVKSPHVQADYHLKLRPGTNTAIITALAHVILSEGLQ
DESYIQERCDLQSYQDWKEFVLREDNSPEAMAAITGVPAETLRGAARLYATGGNAAIYYG
LGVTEHAQGSTTVMGIANLAMCTGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH
ISDSTVRSQFEQAWGVTLNPEPGLRIPNMFDAALDGSFKGLYCEGEDIVQSDPNTQHVAA
ALQAMECIVVQDLFLNETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVMPAKAGKSD
WEVTVALAEALGYPMPYNHPSEIMDEIAALTPSFHGVSYDKLEKLGSIQWPCNEAAPEGT
PIMHVGSFIRGKGKFINTQYFATDEKVTQRYPLILTTGRILSQYNVGAQTRRTENSQWHS
EDRLEIHPHDAEDRGIREGDWVGVESRAGQTVLRATVTENVQPGVVYTTFHFPESGANVI
TTDNSDWATNCPEYKVTAVQVMPVTQPSEWQQHYERFNREQLDLLKGDRQGAPQAEPLVT
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagctcaatgaaacggattacggcacgccggcgcgtgtctcggaaaacatggtc
acgctggagatcgacggcgtggccgtgacggtcccggccggcacctcggtgatgcgcgct
tcggtggaggccggcatcaacgtacccaagctgtgcgctaccgacagcctggaacccttc
ggttcctgccgcctgtgcctggtggaaatcgaaaaggatggccgcaagatgaagggctat
ccggcctcctgcaccacgccctgcgaaccgggcatgaaggtacagacccagacccccaag
ctggccgaaatccgccgtggcgtgatggagctctatatctccgaccacccgctcgattgt
ctgacctgtcccaccaacggcaactgcgaactgcaggacatggccggcgtggtcggcctg
cgcgaagtgcgctacggctacgagggggagaaccatctcaagctgaagaaggatgaatcc
aatccctacttcacctatgacgcctccaagtgcatcgtctgcaaccgctgcgtacgggcc
tgcgaagaaacccagggtacctttgccctgaccatcaacggtcgcggcttcgaatcgcgc
gtctcggccgggcagatggaaagcttcatggaatccgaatgcgtctcctgcggcgcctgc
gtggaagcttgcccgaccgcgaccctgaccgagaagaccgtcatcatgctgggccaggcc
gagcacagcgccgtcaccacctgcgcctactgcggcgtgggctgctccttcaaggtcgag
atgaagggcaatgaagtggtgcgcatggtgccgtacaaggacggcaaggccaaccagggc
cactcctgcgtcaagggccgcttcgcctggggctatgcgacccacaaggaccgcatcctc
aaccccatgatccgcaagagcatcaacgatccctggcgcgaagtctcgtgggaagaggcg
ctgtcctatgcggccagcgaattccgccgcatccaggccaagcatggcaaggattccatc
ggtggcatcacttcctcgcgctgcaccaacgaagaaacctacctggtccagaagctggta
cgcgccgccttcggcaacaacaacgtcgacacctgcgcccgcgtgtgccactcgcctacc
ggctatggcttgaagcagaccctgggcgaatcggccggcacccagaccttcgaatcggtg
atgaagtccgatgtcatcctcatcatgggcgccaacccggcctccggccacccggtgttt
gcctcgcagatcaagcgtcgcgtgcgccagggcgccaagttgatcgtgatcgacccgcgt
accaccgagatggtcaagtcgccgcacgtgcaggccgactatcacttgaagctgcggccc
ggcaccaacaccgccatcatcaccgcgctggcccacgtgatcctgtccgagggtctgcag
gacgagagctacatccaggaacgctgcgacctgcagtcgtaccaggactggaaggagttc
gtgctgcgcgaggacaattcccctgaagccatggccgccatcaccggcgtgccggccgag
accctgcgtggcgcggcccggctgtacgccaccggcggcaatgcggcgatctactacggc
ctgggcgtgaccgagcatgcacagggttcgaccacggtgatgggcatcgccaacctggcc
atgtgtaccggcaacgtcggccgcgaaggcgtgggcgtgaacccgctgcgcggccagaac
aacgtccagggttcctgcgacatgggctccttcccgcatgagctgccgggctatcggcat
atctcggactccaccgtgcgcagccagttcgaacaggcctggggcgtgacgctgaacccg
gaaccgggcctgcgcattcccaacatgttcgatgcggcgctggatggcagcttcaagggc
ctgtactgcgagggcgaggacatcgtccagtccgaccccaacacccagcacgtggccgcg
gccctgcaggcgatggaatgcatcgtggtgcaagacctgttcctgaacgaaacggccaag
tacgcgcatgtgttcctgcccggttcgtccttcctggaaaaggatggcaccttcaccaac
gccgaacgccgcatctcgcgcgtgcgcaaggtgatgccggccaaggccggcaagtccgac
tgggaagtcacggtggccctggccgaagcgctgggttacccgatgccgtacaatcacccc
tctgaaatcatggacgagatcgccgccctgacccccagcttccatggcgtgagctacgac
aagctggaaaaactgggcagcatccagtggccctgcaacgaggcggcaccggaaggcacg
cccatcatgcacgtcggcagcttcatccgtggcaagggcaagttcatcaacacgcaatac
ttcgccaccgacgagaaggtgacccagcgctatccgctgatcctcaccaccggccgtatc
ctgtcgcagtacaacgtgggcgcgcagacgcgccgcaccgagaactcgcaatggcatagc
gaagaccggctggaaatccatccgcacgatgccgaggatcgcggcatccgcgagggcgac
tgggtcggcgtggagtcgcgggccggccagacggtgttgcgcgccacggtgaccgagaac
gtgcagccgggtgtggtctataccaccttccacttcccggagtccggtgccaacgtgatc
accaccgacaactccgactgggccaccaactgccccgagtacaaggtgacggcggtgcag
gtgatgccggtgacgcagccttccgagtggcagcagcactacgagcgcttcaaccgcgag
cagctggatttgctcaagggagacaggcagggcgccccgcaggccgaaccactggtgacc
aagtaa
DBGET
integrated database retrieval system
