Herbaspirillum frisingense: G5S34_09530
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Entry
G5S34_09530 CDS
T06761
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hfr03009
]
G5S34_09530
Enzymes [BR:
hfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
G5S34_09530
Ribosome biogenesis [BR:
hfr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
G5S34_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QNB06986
LinkDB
All DBs
Position
2119364..2120086
Genome browser
AA seq
240 aa
AA seq
DB search
MAKLTLDRILQSQGFGSRKYCRELIEDGEVSIGGEVVDDYRATPDTTGLVLTIFEEEWEY
REHVYIAINKPPNIECSRKPSHHPGVLTLLPEQFTWRDVQPVGRLDHDTTGLLLMSDDGA
FIHAQSSPKRHVPKVYAATTAEPVTQALIDQLKAGVQLHDEPAPLAATRCRQLGEHLLEI
VLEQGKYHQVKRMLAAAGNHCSALSRVAIGGLQLEALGLEEGEWTYLDAQQMALLVPDQE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctgaccctggaccgcatcctgcaatcgcagggtttcggttcgcgcaagtat
tgtcgtgaactgatcgaggatggtgaagtctcgatcggtggtgaagtggtggacgattac
cgggccacgccagataccaccgggctggtgctgaccatcttcgaggaagagtgggaatac
cgcgagcacgtctacatcgccatcaacaagccgcccaacatcgagtgctcgcgcaagccc
agccatcatccgggcgtgctgaccttgctgccggaacagttcacctggcgcgatgtgcaa
ccggtggggcgactggatcacgataccaccggactgttgctcatgtccgacgacggcgcc
ttcatccacgcccaatcctcgcccaagcgccacgtccccaaggtgtatgcggccaccacc
gccgagccggtgacccaggcgctgatcgaccagctgaaggccggcgtgcaactgcatgac
gaaccggccccgctggccgccacccgctgccgccaactgggcgaacacctgctggagatc
gtgctggagcagggcaaataccatcaggtcaagcgcatgctggctgccgccggcaatcat
tgcagcgccctgtcccgggtcgccatcggtggcttgcaactggaggcgctggggctggag
gagggggagtggacttacctggatgcgcaacagatggcgctgctggtgccggatcaggag
tga
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