KEGG   Herbaspirillum frisingense: G5S34_10095
Entry
G5S34_10095       CDS       T06761                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
hfr  Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:hfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hfr03032]
    G5S34_10095
   03036 Chromosome and associated proteins [BR:hfr03036]
    G5S34_10095
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hfr02048]
    G5S34_10095
Enzymes [BR:hfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     G5S34_10095
DNA replication proteins [BR:hfr03032]
 Prokaryotic type
  DNA Topoisomerases
   G5S34_10095
Chromosome and associated proteins [BR:hfr03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    G5S34_10095
Prokaryotic defense system [BR:hfr02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    G5S34_10095
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim RloB
Other DBs
NCBI-ProteinID: QNB07087
LinkDB
Position
complement(2238425..2240413)
AA seq 662 aa
MATKKTSPSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHILQEVIDNASDEALGGYGKS
IIVTLNADGSVSVEDDGRGIPVGLHPEEKVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGL
HGVGVSVTNALATRLEITVWREGGVHTLAFSGGDVIEKLKSRPATREDKKSGTRVTVWPD
ARYFDSPTIPLGELQRLLRSKAVLLPGVKVTFTNARSGDSQSWQYDQGLRGYLMEQLAQS
GSGETLIPLFEGEQFAGKDAEGFAEGEGASWVVAWTEEGAVVRESYVNLIPTSNGGTHES
GLREGLFSAVKSFAEMHSLLPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQIKERLNSRD
AVRLVAGYSRPALELWLNQHVEYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLPGKL
TDCESSDVSRNEIFLVEGDSAGGSAKMGRDKEFQAVLPLRGKVLNAWETERDRLFANNEI
HDIAVAIGVDPHGINDSPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIENG
NICVARPPLYRVDAPARGKKPVQKLYALDDGELEAIEDKLRKDGLKEGAWSISRFKGLGE
MNAEQLWETTMNPDTRRLLPIGFGEPGVQTSEERFNMLMGKGEAASRRAWIEEHGNEAEA
DI
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcaaccaaaaaaacatccccgtccgattacagtgaatcatcgatccgtgtcctcaaa
ggactggagccggtcaagcagcgtccgggcatgtacacccgcaccgagaacccgctgcac
atcctccaggaagtgatcgacaacgcctccgacgaagcgctgggcggctacggcaagagc
atcatcgtcaccctgaacgccgacggcagcgtcagcgtggaagatgacggccgcggcatc
ccggtcggcctgcacccggaagaaaaggtccccaccgtcgagatcgtgttcacccgcctg
cacgcgggcggcaagttcgacaagggctccggcggcgcctatgccttctccggcggtctg
cacggcgtgggcgtgtcggtcaccaatgccctggccacgcgtctggaaatcacggtctgg
cgtgaaggcggcgtgcataccctggccttctccggcggcgacgtcatcgaaaagctcaag
tcgcgccccgccacccgcgaggacaagaaatccggcacccgcgtcacggtctggcctgac
gccaggtatttcgattcgcctaccatcccgctgggcgagctgcaacgcctgttgcggtcc
aaggcagtgctgctgccgggcgtgaaggtgaccttcaccaatgccaggagcggcgacagc
cagagctggcagtacgaccagggcctgcgcggctacctgatggaacaactggcccagagc
ggcagcggcgagaccctgatcccgctgttcgagggcgagcagttcgccggcaaggatgcc
gaaggcttcgccgagggcgaaggtgcctcctgggtggtggcctggaccgaggaaggcgcc
gtggtgcgcgagtcctacgtcaacctgatccccacctccaacggcggcacccatgaatcg
ggcctgcgcgaaggcctgttctcggccgtgaagagcttcgccgagatgcattcgctgctg
cccaagggcgtcaaactgctggccgaggacgtgtttgcacgggtttccttcgtgctctcg
gccaaggtgctggacccgcaattccagggccagatcaaggaacgtctcaactcccgcgac
gccgtgcgcctggtggccggttattcgcgcccggcgctggagctgtggctgaaccagcac
gtcgagtatggcaagaagctcgccgagctggtcatcaagcaagcccagagccgcctgcgt
tcggcgcagaaggtcgagaaaaagaagtcttccggcgtggccgtgctgccgggcaagctg
accgattgcgaatcctcggatgtgtcgcgcaatgaaatcttcctggtcgagggcgactcc
gccggcggctcggccaagatgggccgcgacaaggaattccaggccgtcctgccgctgcgc
ggcaaggtcctgaacgcctgggaaaccgaacgcgaccgcctcttcgccaacaatgagatc
cacgacatcgccgtggccatcggcgtcgatccgcatggcatcaacgacagcccggacctg
tccggcctgcgctacggcaagatctgcatcctctcggatgcggacgtggatggctcgcac
atccaggtgctgctgctgacgctgttcttccgtcacttccccaagctgatcgagaacggc
aacatctgcgtggcgcgtccgcccctgtatcgcgtggatgcccccgcgcgcggcaagaag
ccggtgcagaagctgtatgccctggacgatggagaactcgaagccatcgaagacaagctg
cgcaaggatggcttgaaggaaggtgcctggagcatttcccgcttcaaaggcctgggcgag
atgaatgccgaacagctgtgggaaaccaccatgaacccggacacccgccgcctcttgccc
atcggctttggcgaacccggtgtgcagacctcggaagagcgtttcaacatgctcatgggc
aagggcgaagccgcctcccgccgcgcctggatcgaagagcacggcaacgaagccgaagcc
gatatctga

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