Herbaspirillum frisingense: G5S34_11905
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Entry
G5S34_11905 CDS
T06761
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hfr03029
]
G5S34_11905 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hfr02000
]
G5S34_11905 (bamA)
Mitochondrial biogenesis [BR:
hfr03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
G5S34_11905 (bamA)
Transporters [BR:
hfr02000
]
Other transporters
Pores ion channels [TC:
1
]
G5S34_11905 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
QNB07405
LinkDB
All DBs
Position
2624233..2626605
Genome browser
AA seq
790 aa
AA seq
DB search
MKLHPAQHPIPTFSRRLIAAAAFALCSSQAMAVAPFVVKDIRVEGIQRTEAGTVFSYLPV
RVGDTFNDEKATAAIKALYATGFFRDVRIEAEGDVLVVQVVERPAIASVDFSGIKEFDKE
QLTKALKEIGVAESRIFDRSQVDRAEQELKRQYLSRGLYGAKVSTTVTPVERNRVAITFS
VDEGEVSRIKQINFVGNKVFSDSTLRDQIKLTTPGWFTWYTKADQYSKEKLQGDIETLRS
YYLDRGYLEMQVESTQVSITADKKDIYITVNIKEGEKYTVSGVKLEGEMFGMEPELSKLV
QLKPGDVYSGAKLTDSTKKIGERLGNFGYAFANVNANPNVDREKKEVAFTIMVDPGKRVY
VRHVNIAGNTKTRDEVIRREFRQFEDSWYDGEKIKLSRDRVDRLGYFKEVTVDTPEVPGT
SDQVDLNMKVEEKPTGNIMVGAGFSQSDKLSLTGSISQENAFGSGNTVGIEVNTSSRYRT
ISLSTTNPYFTDDGISRTYEIYLRTIRPSVYTTGDYRVKTLGGSIKFGVPFSELDRVFFG
IGVENTNVSTDTTSPSLYRQYVRDFGGAGAAGCDVVNDASCGVGSARTTSIPLTIAWQRD
GRDSALVPTSGRYQRANFEVSYVGTLKYYRASYQHQYFQPFFSKAVTLALNGEVDYGRGI
GSKPYPVFKNYYAGGIGTVRGYEASSLGTLKDQYGDSMGGASRLYGNAELQFPFPGSGQD
RTLRWFTFFDGGNVFADGQNIKLNDLRYSAGVGISWVSPIGPLKLSFGKPLNLKTGDKSQ
TFQFQLGTGF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacaccctgcgcaacatcccatcccgactttctcccgtcgcctgatcgccgca
gccgcctttgccctgtgctccagccaggccatggcggtcgcgcccttcgtggtcaaggat
atccgcgtcgaaggcatccagcgtaccgaggccggcacggtctttagctacctgccggtg
cgcgtgggcgacacgttcaacgatgaaaaggccactgctgccatcaaggcgctgtatgcc
accggcttcttccgcgatgtgcgcatcgaggcggaaggcgacgtgctggtggtgcaggtg
gtcgaacgtccggccatcgccagcgtcgatttctccggaatcaaggagttcgacaaggaa
cagctgaccaaggcgctcaaggaaatcggcgtggccgagtcgcgcatcttcgaccgctcc
caggtcgatcgtgccgagcaggaattgaagcgccagtacctgtcgcggggcctgtacggc
gccaaggtgtccaccaccgtcaccccggtcgagcgtaatcgcgtggcgattaccttctcg
gtggacgaaggtgaagtttcccgcatcaagcagatcaatttcgtcggcaacaaggtgttc
tccgacagcaccctgcgtgaccagatcaagctgaccaccccgggctggttcacctggtac
accaaggccgaccagtattccaaggaaaagctgcagggcgacatcgagaccctgcgctcg
tactacctggatcgcggctacctggaaatgcaggtcgaatcgacccaggtgtcgatcacg
gccgacaagaaggacatctacatcaccgtcaacatcaaggaaggcgagaagtacaccgtc
tccggcgtcaagcttgaaggcgagatgttcggcatggagccggaactgtccaagctggtg
cagctgaagccgggcgacgtctattccggcgccaagctcaccgacagcaccaagaagatc
ggcgagcgcctgggcaacttcggctatgccttcgccaacgtcaacgccaaccctaatgtc
gatcgcgaaaagaaggaagtcgccttcaccatcatggtcgacccgggcaagcgcgtctac
gtgcgtcacgtcaacatcgccggcaacaccaagacccgcgatgaggtgatccgccgcgaa
ttccgccagttcgaggattcctggtacgacggcgaaaagatcaagctctcgcgcgaccgc
gtggaccgtctgggctacttcaaggaagtcaccgtcgatacgccggaagtgccgggtacc
agcgaccaggtggacctcaacatgaaggtcgaggaaaagccgaccggcaacatcatggtc
ggcgccggcttctcgcagtccgacaagctcagcctgaccggctcgatctcgcaggaaaac
gccttcggtagcggtaataccgtgggtatcgaggtcaacaccagctcgcgctatcgcacg
atctcgctgtcgaccaccaatccgtattttaccgatgacggcatcagccgcacctacgaa
atctacctgcgcacgatccgtccctcggtctatacgaccggtgactatcgcgtcaagacg
ttgggtggcagcatcaagttcggcgtgccgttctcggaactggatcgcgtcttcttcggc
atcggcgtggaaaacaccaacgtcagcaccgataccaccagcccgtcgctgtatcgtcag
tatgtgcgtgacttcggtggcgccggcgcggcaggttgcgatgtggtcaacgatgcaagc
tgcggtgtcggcagcgcccgtaccaccagcatcccgctgaccatcgcctggcagcgagat
ggccgcgattcggctctggtgccgacttccggtcgctatcagcgtgccaatttcgaagtt
tcctatgtgggtaccctgaagtactatcgtgccagctatcagcaccaatacttccagccc
ttcttcagcaaggccgtgaccctggccctgaatggcgaagtggactatggccgcggcatc
ggcagcaagccatatccggtgttcaagaactactatgccggcggtattggcaccgtgcgc
ggctacgaggcgtcttcgctgggtacgctgaaggaccagtacggcgactccatgggtggc
gcctcgcgtctgtacggcaacgccgagttgcagttcccgttcccgggttcgggccaggac
cgtacgctgcgctggttcaccttctttgacggcggcaacgtcttcgctgacggccagaac
atcaagctgaacgacctgcgttattcggccggtgtgggtatcagctgggtgtcaccaatc
ggccctctgaagctcagctttggtaaaccattgaacctgaagacgggtgacaagtctcaa
accttccagttccaactgggtaccggcttctaa
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