Herbaspirillum frisingense: G5S34_12295
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Entry
G5S34_12295 CDS
T06761
Name
(GenBank) LysR family transcriptional regulator
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hfr03000
]
G5S34_12295
Transcription factors [BR:
hfr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
G5S34_12295
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Paralog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
OST48_N
Motif
Other DBs
NCBI-ProteinID:
QNB07474
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Position
2710905..2711846
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AA seq
313 aa
AA seq
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MELRQLRYFVAIVDHGSLSRAARVLHIAQPALTQQIRQLEDEMEAQLLHRSAQGVIATDA
GKVFYEHALAILKQVQDAKQAVAQSTDKPSGTVALGIPQSVSNALALPLLNAVRSTYPEI
TLQLTEELTGNLITQLKSGRINLAVLFDDGQLSSFAATPMIEEEMLYITRAKSQYGVSGR
KGVPLARAIQAPLILPGLAHGVRPRIENLVRAQGMSLDNVIEINSVAILKSAILADIGAT
ILPVAPLLADIERGDMVAHAIAGETISRTLVLCASRNIPLTTAAAAVERLVLDVTDQLCR
SGQWGHTRVLDRE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaattacgccaactgcgctacttcgtggccatcgtcgatcacggctcgctctcgcgg
gcggcacgggtgctgcacatcgcccagccggcgctgacccagcagatccgccagctggaa
gacgagatggaggcgcaactgctgcaccgctcggcccagggcgtgatcgccaccgatgcc
ggcaaggtcttctatgagcacgcgctggcgatcctcaagcaggtgcaggatgccaagcag
gccgtggcgcaatccaccgataaaccctcgggcaccgtggcgctgggtattccgcagagc
gtgtccaatgcgctggccctgccgctgttgaacgcggtgcgttccacctatccggaaatc
acgctgcaactgaccgaggaactgaccggcaacctcatcacccagctcaagtccggccgc
atcaacctggcggtgctgttcgatgatggtcagctgtcctcgttcgcggccacgccgatg
atcgaggaagagatgctgtacatcacccgggccaagtcgcaatacggcgtttccgggcgc
aagggcgtgccgctggcgcgcgccatccaggcgccgctgatcctgcccggcctggcccat
ggcgtgcgcccgcgcatcgaaaacctggtacgcgcccagggcatgagcctggacaatgtc
atcgagatcaattcggtggccatcctgaagtcggccatcctggccgatatcggtgccacc
atcctgccggtggcgccgctgctggccgacatcgagcgcggcgacatggtggcccatgcc
atcgccggcgaaaccatctcgcgcacgctggtcttatgcgcttcccgcaacatccccctg
accaccgcagcggcggccgtggagcgactggtgctggacgtgaccgaccagctgtgccgc
tccggccaatgggggcatacccgcgtgctggaccgtgaatga
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