Herbaspirillum frisingense: G5S34_12920
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Entry
G5S34_12920 CDS
T06761
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5S34_12920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hfr02000
]
G5S34_12920
Transporters [BR:
hfr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G5S34_12920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QNB07577
LinkDB
All DBs
Position
2857424..2858284
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AA seq
286 aa
AA seq
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MLAQPKTRLGLMLVTPALIFTVVCFLLPVAALLLGAFRTGGPDSLDGGPLQWSLARFADF
FAEPLHLQVLWRTLRIAALVTLCSALLCYPAAQAIVRVAPRWRGLVLGMMILPLMVSPIA
RTYAWIVLFGRNGAVNAVLLQLGLTDEPQRLLFTEMAVFVGLLQLLLPLMLMSLVSAMEN
ISADLALAASTLGANAWQVFTRVTLPLTQEGLIVGGTLVFTGSVTAYVTPALLGGPKVLM
LETLLYQKVSVESDFGTANVIAVILVAMTLAVNAGLKRIAAPRRTT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccaacccaaaacccgcctcggcctgatgctggtcacgccggcgctgatcttc
accgtggtctgcttcctgctgccggtggccgccctgctgctgggcgccttccgcaccggc
ggcccggacagcctggacggtggcccgctgcaatggagcctggcccgcttcgccgatttc
ttcgccgaaccgctgcacctgcaggtgctgtggcgcaccctgcgcatcgccgccctggtc
accctgtgctcggctctgctgtgctatcccgccgcgcaagccatcgtccgggtggcgcca
cgctggcgcggactggtgctgggcatgatgatcctgccgctgatggtgtcgcccattgcg
cgcacctatgcctggatcgtgctgttcgggcgtaatggcgcggtcaatgccgtgctgctg
caactgggcctgaccgatgaaccgcaacgcctgctctttaccgagatggcggtgttcgtg
ggcttgctgcagttgctgctgccgctgatgctgatgtcgctggtcagcgccatggaaaac
atctccgccgacctggcgctggcggcctccaccctcggcgccaatgcctggcaggtcttc
acccgcgtgaccctgccgctgacccaggagggcttgatcgtgggcggcacgctggtgttc
accggcagtgtcaccgcctatgtcaccccggccttgctgggcggacccaaggtcttgatg
ctggaaaccctgctctaccagaaggtcagcgtggagagcgacttcggcaccgccaacgtg
atcgcggtgatcctggtggcgatgacgctggccgtcaacgccggattgaaacgcattgcc
gctccccggaggacgacatga
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