Herbaspirillum frisingense: G5S34_13395
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Entry
G5S34_13395 CDS
T06761
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00500
Starch and sucrose metabolism
hfr01100
Metabolic pathways
hfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
G5S34_13395 (glgX)
Enzymes [BR:
hfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
G5S34_13395 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Cu-oxidase_2
Motif
Other DBs
NCBI-ProteinID:
QNB07663
LinkDB
All DBs
Position
complement(2968168..2970429)
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AA seq
753 aa
AA seq
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MSVAFPDRLMPGLPYPLGASSDGLGVNFAVFSANATRMDLCLFDPSGKRELKRIQLPECT
DEVWHGYLPGAAPGLVYGFRAHGPYEPNKGHRFNPNKLLLDPYAKRLVGQVRWTDALYGY
RLHSARADLSFDRRDSAAAMPKAMVNEDAFVWEHDRLPQVPWNKTVIYEAHVKGISRMRE
DLLPHERGTFAALSDPAFIDHLLRLGVTTLELMPVHAFLQDSFLVERGLSNYWGYSTLSY
FAPEPSYMSMGDPNELRMAVRRLHSAGIEVILDVVYNHTSCGSELGPTLSFRGLDNASYF
RLMPGQERYHINDTGCGNTLNLSHPRVLQMVLDSLRYWAQSFHIDGFRFDLGSTLGREPH
GFDPGSGFFDALLQDPVLSRLKLISEPWDIGPGGYQLGNHPARFGEWNDKFRDDMRKFWK
GDEAMRGGFAQRMLGSAELFEHHRRKPWASINFIASHDGFTLRDLVSYNGKHNEANGENN
NDGHNDNASYNWGAEGETDDAAIQATRANVQRSMLASTLLAQGTPMLLAGDEFNRSQGGN
NNAYCQDNEISWINWEQARSPEGAALTAFVGRVTAIRRDFEVLRASYFLHGAQKVADGLP
DVAWFDEAARPVSSEDWNNPVARAITLQLAGKRQEAHKQLSSRIQDAANTDAPGDIPEAI
PDVLTIFVNAGHEPIEFHFPRTEGEYCLLLDSAHPTGMPEGEGAAARVQGSATVQVQAHS
LQVFANRPLHLSSAIYPLAANEWIARNEWGERA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgcctttcctgatcgcctgatgccaggcctgccttaccccctgggcgccagc
tccgacggcctgggggtcaattttgcggtgttctcggccaacgccacccgcatggatctc
tgcctgttcgacccctccggcaagcgcgaactcaagcgcatccagctgcccgaatgcacc
gacgaggtgtggcacggttacctgccaggcgccgccccggggctggtctatggcttccgc
gcccatggcccctacgaacccaacaagggccatcgcttcaatcccaacaagctgctgctg
gacccctatgccaagcgcctggtgggccaggtgcgctggaccgatgcgctctatggctac
cgcctgcattcggcccgcgccgacctgtccttcgaccggcgcgacagtgccgccgccatg
cccaaggccatggtcaacgaagacgccttcgtctgggaacatgaccgcctgccgcaggtg
ccgtggaacaagacggtgatctacgaggctcacgtcaagggcatctccaggatgcgcgaa
gacctgctgccgcacgaacgcggcaccttcgccgcgctgtccgatccggcattcatcgac
cacctgctgcggctgggcgtgaccacgctggaactgatgccggtgcatgccttcctgcag
gacagcttcctggtcgagcgtggcctgagcaactactggggctacagcacgctctcgtat
ttcgcgcctgagccgtcctacatgtccatgggcgaccccaacgagctgcgcatggccgtg
cggcgcctgcacagcgccggcatcgaggtcatcctcgacgtcgtctacaaccacaccagc
tgcggcagcgaactgggccccacgctgtcgttccgggggctggacaatgccagctacttc
cgcctgatgcccggtcaggagcgctatcacatcaatgacaccggctgtggcaacacgctg
aacctgtcacaccctcgcgtgttgcagatggtgctggactcgctgcgctactgggcgcag
tccttccatatcgatggcttccgcttcgacctcggttccaccctggggcgcgagccgcat
ggcttcgaccccggttcgggcttcttcgatgcgctgctgcaggaccccgtgctgtcgcgc
ctgaagctcatttccgaaccctgggacatcggccccggcggctaccagctgggtaaccat
ccggcccgtttcggcgaatggaacgacaagttccgcgacgacatgcgcaagttctggaag
ggcgacgaggccatgcgcggcggcttcgcccagcgcatgctgggttcggccgagctgttc
gaacaccatcgccgcaagccctgggccagcatcaacttcatcgcctcgcacgacggcttc
accctgcgtgacctggtcagctacaacggcaagcacaacgaggccaatggcgagaacaac
aacgacggccacaacgacaacgccagctacaactggggtgccgaaggcgagaccgacgat
gccgccatccaggccacccgcgccaacgtgcaacgctccatgctggcctcgaccctgctg
gcgcaaggcacaccgatgctgctggccggcgacgaattcaaccgcagccagggcggcaac
aacaatgcctactgccaggacaatgagatctcctggatcaactgggagcaggcccgctcg
cccgaaggcgccgcgctgaccgccttcgtgggccgcgttaccgccatccgccgcgacttc
gaggtcctgcgcgccagctatttcctgcatggcgcgcagaaggtggctgatggcctgccg
gatgtggcctggttcgacgaggcggcgcgcccggtctccagcgaagactggaacaatccg
gtggcccgcgccatcaccctgcaacttgccggcaagcgtcaggaggcgcacaagcagctg
agttcgcggatccaggacgccgccaataccgatgcgcccggcgacattcccgaagccatc
ccggatgtgctgacgatcttcgtcaatgccggccatgagcccatcgagttccacttcccc
cgcaccgaaggcgaatactgcctgctgctggacagcgcccaccccaccggcatgccggaa
ggcgagggtgcagcggccagggtgcagggcagcgccacggtgcaggtacaggcccatagc
ctgcaagtgttcgccaaccggccgctgcacctgtcctcggccatctacccgctggcggcc
aatgaatggattgcccgcaacgaatggggagagcgcgcatga
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