Herbaspirillum frisingense: G5S34_13485
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Entry
G5S34_13485 CDS
T06761
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hfr03000
]
G5S34_13485
Transcription factors [BR:
hfr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
G5S34_13485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QNB07679
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Position
2992000..2992995
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AA seq
331 aa
AA seq
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MSSLALSQPDTVATHSRRALRTAVARDVDEHAHNLTDWEQRYDQLACGSFEGVLQEWQSE
GLQIFREAGSRAVRQSCRVWPDAYWFGIEVRTMGMRINGRLVPQDVVMTRPGACEFELVT
PDQHDIFGVVVQRDALQASAARLGCQPDWRRLGQAEMLKVDAGGLDDCRHQIGALLALAG
QASGQAAHAALQLRQEAVLVSLLALLDEGDIEAEAGASLLRRRRIVNDARDLALAHQESP
VTVPMLCEALHVSRRTLQYCFEDVLGVSPMSYLRLLRLNGVRRALAQGDGRQPIGDIAAA
WGFSNFSQFSCDYKKLFGQSPSAMLQARTSH
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcttgcactgtcccagcctgacacagtggcaacgcacagccggcgggcattg
cgcaccgccgttgcgcgtgacgtggacgaacatgcccataacctcaccgactgggagcag
cgctacgaccagttggcctgcggcagcttcgagggcgtgctgcaggagtggcagagcgag
ggtctgcagatcttccgcgaggccggcagccgtgcagtgcgccagtcctgtcgggtctgg
ccggatgcctactggttcggcatcgaggtgcgcaccatgggcatgcgcatcaatggccgc
ctggtgccacaggacgtggtgatgacccgacccggcgcctgcgaattcgaactggtcacg
ccggatcaacatgacatcttcggtgtcgtggtccagcgcgatgccctgcaggccagcgcc
gcccggctcggctgccagcccgactggcgccggctgggtcaggccgaaatgctgaaggtc
gatgccggcgggctggacgattgccgccaccagatcggcgccctgctcgcgctggccggc
caggccagcggccaggcagcccatgccgccctgcaactgcgccaggaagcggtgctggtc
tcgctgctggcactgctggatgaaggcgacatcgaagccgaggccggcgccagcctgttg
cgccgccgtcgcatcgtcaacgatgcccgcgatctggccctggcccatcaggaaagcccg
gtcaccgtgcccatgctgtgcgaggcattgcatgtgagccggcgtacgctgcaatactgt
ttcgaggatgtgctgggcgtgagcccgatgagctacctgcgcctgctgcgcctgaacggc
gtacgccgcgcgctggcccagggcgatggccgacagcccatcggcgacattgcggcggcc
tggggtttcagcaatttcagccagttctcgtgcgattacaagaaactgttcggccagtcg
ccctcggccatgctgcaggcccgtacgtcgcactga
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