Herbaspirillum frisingense: G5S34_13720
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Entry
G5S34_13720 CDS
T06761
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00061
Fatty acid biosynthesis
hfr00071
Fatty acid degradation
hfr01100
Metabolic pathways
hfr01212
Fatty acid metabolism
hfr02024
Quorum sensing
hfr04146
Peroxisome
Module
hfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G5S34_13720
00071 Fatty acid degradation
G5S34_13720
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G5S34_13720
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5S34_13720
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hfr01004
]
G5S34_13720
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hfr04147
]
G5S34_13720
Enzymes [BR:
hfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G5S34_13720
Lipid biosynthesis proteins [BR:
hfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G5S34_13720
Exosome [BR:
hfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
G5S34_13720
Exosomal proteins of breast cancer cells
G5S34_13720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QNB07717
LinkDB
All DBs
Position
complement(3044065..3046026)
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AA seq
653 aa
AA seq
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MVETRQDNQAATFPRLLQAHARQRPERAAFREKDLGIWQTTSWRQVADEVRSFACGLAAL
GFKRGMSLAIIGNNCPRLYWAMSAAQALGGMPVPLYQDAPAADMAYVLADANVDFVMAED
QEQVDKVFEIKENLPRIAHVIFDDERGMRNYHQPELLSFARVQELGRAYEHAHPDFFEKE
VAAGSPDDVAIILYTSGTTGKPKGVCHSHRAMITTATTLVEFDHLDQDDDILCYLPLAWV
GDFLYSFAQQHVAGFCLNCPESPNTVMTDLREIGPTYYFAPPRVYENILTQVMIRIEDAG
WLKRKMFHGFMRVARRVGMRILDGKPGVSLMDRLQYALGDLLVYGPLKNVLGMSRLRVAY
TGGEAIGPDLFDFYRSMGINLKQLYGMTETCVTVCMQPSGDVKLDSVGRPMKGVEVRIDD
NGEVLVRSPGLMKEYFKRPDATAEAIDANGYFHTGDAGFFDSDGHLKIIDRAKDVGKMAC
GSMFAPKYIENKLKFFPFIKEAVTFGNGREQCMAFINIDMDAVGNWAERRNLPYSGYTDL
AANPAVYELVRECVEKVNADLVADPLLADSQVHRFLILHKELDPDDEELTRTRKVRRGFI
AEKYAVLIEALYDGRPSQYIETQVKFEDGRQGMIAADLKIAEAKTFKTLQSAA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggtggagacgagacaagacaaccaggccgcgacctttccgcggctgctgcaggcgcat
gcccgccaacgccccgagcgggccgccttccgcgagaaggacctgggtatctggcagacc
acgagctggcgccaggtggccgacgaggtgcgcagctttgcctgcggcctggcggccctg
ggcttcaagcgcggcatgagcctggccatcatcggcaacaactgcccgcgcctgtactgg
gccatgagcgccgcgcaggcgctgggtggcatgccggtgccgctgtaccaggacgcaccg
gccgccgacatggcctatgtgctggccgacgccaacgtcgacttcgtcatggccgaagat
caggagcaggtcgacaaggtcttcgagatcaaggaaaacctgccccgcatcgcccacgtc
atctttgacgacgagcgtggcatgcgcaactaccaccagcccgaactgctgtcctttgcc
cgcgtgcaggaactgggccgcgcctacgagcacgcccatcccgacttcttcgagaaggaa
gtcgcggccggctcgcccgacgacgtcgccatcatcctctatacctccggcaccaccggc
aagcccaagggcgtgtgccattcgcaccgggccatgatcactaccgccaccacgctggtg
gagttcgatcatctggaccaggacgacgacatcctgtgctacctgccgctggcctgggtg
ggtgatttcctgtactccttcgcccagcagcacgtcgccggtttctgcctgaactgcccg
gagtcgcccaataccgtcatgaccgacctgcgcgagatcggcccgacctattacttcgcg
ccgccgcgcgtgtatgaaaacatcctgacccaggtcatgatccgcatcgaggatgcgggc
tggctcaagcgcaagatgttccatggtttcatgcgcgtggcgcgccgggtcggcatgcgc
atcctggatggcaagccgggcgtgtcgctgatggaccggctgcaatatgcgctgggcgac
ctgctggtctacgggccattgaagaacgtgctgggcatgtcgcgcctgcgcgtggcctat
accggcggcgaggccatcggccccgacctgttcgacttctaccgctccatgggcatcaac
ctgaagcagctctatggcatgaccgagacctgcgtgacggtgtgcatgcagccctcgggc
gacgtcaagctcgatagcgtgggccggcccatgaagggcgtggaagtgcgcatcgacgac
aacggcgaagtgctggtgcgttcgcccggcctgatgaaggaatacttcaagcgccccgac
gccactgccgaggccatcgacgccaacggctacttccacaccggtgacgccggcttcttc
gacagcgacggccacctcaagatcatcgaccgcgccaaggatgtcggcaaaatggcctgc
ggcagcatgttcgcgcccaagtacatcgagaacaagctgaagttcttccccttcatcaag
gaagcggtgaccttcggcaacggccgcgagcagtgcatggccttcatcaacatcgacatg
gatgccgtgggcaactgggccgaacggcgcaacctgccttacagcggctacaccgacctg
gccgccaatcccgcggtgtacgaactggtgcgcgaatgcgtggaaaaggtcaatgccgac
ctggtggccgacccgctgctggccgattcgcaggtccatcgcttcctgatcctgcacaag
gaactggatcccgacgacgaagagctgacccgcacccgcaaggtccggcgcggcttcatc
gccgagaagtacgcggtgctgatcgaggcgctctacgacggtcgcccgtcgcaatacatc
gagacccaggtcaagttcgaggatggccgccagggcatgatcgcagccgacctgaagatc
gccgaggccaagaccttcaagacgctgcaaagcgccgcctga
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