Herbaspirillum frisingense: G5S34_13950
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Entry
G5S34_13950 CDS
T06761
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hfr03000
]
G5S34_13950
Transcription factors [BR:
hfr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
G5S34_13950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
MarR_2
HTH_28
PBP_like_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QNB07757
LinkDB
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Position
complement(3093371..3094231)
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AA seq
286 aa
AA seq
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MTPSQLRAFLAVARHRGFSAAARALGVSQPTLTTQVQSLEREHNVELFFRRGRRVDLSET
AQRLLPIAQNIAELELDALNLLVNSGALHVGHLRIGAVGPFHVIEMVDAYRARYPQVELS
IKLGNSAQSLADLENYVTDVAVLASVTDDARFHALPYADHAVVLFAHRSHPFYQRETVAL
AELEQQPMLMREQGSTTRLALEKVLQQAGVKPRVMMEIGSREALREAVARGLGLAAVSEA
EFIPDERFRMVRIEGDPVSTHTYVYCLAERREGRLVGSFMKIAARS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgactccttcacaactgcgcgccttcctcgccgtggcccgccatcgcggcttttcggcg
gcggcccgggccttgggcgtgagccagccgaccctgaccacccaggtgcaatcgctggag
cgcgaacacaatgtggaactgttcttccgccgggggcggcgggtggacctgtcggagacg
gcgcagcgcctgttgccgatcgcgcagaacattgccgagctggaactggatgcgctgaat
ctgctggtcaattcgggagcgctgcatgtggggcatctgcgcatcggcgcggtcgggccg
ttccacgtgatcgagatggtggacgcctaccgcgcccgttatccgcaggtcgagctgtcg
atcaagctgggcaactcggcgcagtcgctggccgacctggagaactacgtgaccgatgtc
gcggtgctggccagcgtgaccgacgatgcgcggttccacgcgctgccctatgccgatcac
gcggtggtgctgtttgcccatcgcagtcatcccttctaccagcgcgagacggtcgccctg
gccgaactggaacagcagccgatgctcatgcgcgaacagggttcgaccacccggctggcg
ctggaaaaggtgttgcagcaggccggcgtgaagccccgcgtgatgatggagatcggcagc
cgcgaagccctgcgcgaggcggtggcacgcggcctggggctggcggcggtgtcggaggcg
gagttcattcccgacgagcgttttcgcatggtgcgcatcgagggcgacccggtgagcacc
cacacctatgtctattgcctggccgagcgccgggaagggcggctggtcgggtccttcatg
aagatcgctgcgcgtagctga
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