Herbaspirillum frisingense: G5S34_14560
Help
Entry
G5S34_14560 CDS
T06761
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr03420
Nucleotide excision repair
hfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5S34_14560
03430 Mismatch repair
G5S34_14560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_14560
Enzymes [BR:
hfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S34_14560
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5S34_14560
MMR (mismatch excision repair)
Other MMR factors
G5S34_14560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
AAA_12
HHH_5
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QNB07863
LinkDB
All DBs
Position
3221880..3224042
Genome browser
AA seq
720 aa
AA seq
DB search
MLPDLTREAPASSPTRSQTAHPSAADDDAAQERDPFARLNAEQRAAVEHGSGLPPSQQTP
LLIVAGAGSGKTNTLAHRVARLVLEGADPQRILLLTFSRRAAGDMGRRVGQVIRQVLGLA
AADAPPQLPWSGTFHAIGARLLRDYASVIGLEDDFTIQDRGDSEDLMGLLRHEMGLSSTD
KRFPLKATCLAIYSRAVNTRQDLAQVLQVHFPWCREWERPLGELFARYVDAKEAQHVLDY
DDLLLFWADMLSDPEIAQSVSARFDHVLVDEYQDTNRLQAEILQRMKPDGAGVTAVGDDA
QSIYSFRGATVRNILDLPSLFTQPARLLTLEQNYRSTQPILQASNAVIADAPERHFKNLW
SDKPSSQKPQLVVIPDEAEQARWVANRILAHREEGLTLKSQAVLFRTATHSAALELELVR
RNIPFVKFGGLKFLESTHIKDLLSLLRLAHNPSGRMAGLRALQLIPGVGPATARKVLDLM
AGAADPADALLHFGAPANIALQWQAFADTYALMRRASATWPTDINAARDWYLPQLEQRYE
DADARAADIEQLAALARGYASREKFLTELTLDPPESSSDFSAPPYRDEDYLTLSTIHSAK
GQEWRSVHVLNVVDGCIPSDLATGSEAEIAEERRLLYVAMTRAKEYLHLIVPQRFYITQQ
TAQGDRHVNAIRSRFITPRMLPHFEDSLWLSAETNGARTPMPESVRMLVRQRAKQAWNKS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagacctcacccgggaagcgccggcgtcctcgcccacccgttcccagaccgcc
caccctagcgccgctgacgacgacgctgcgcaggagcgcgatcccttcgcccgcctcaat
gccgaacagcgcgccgccgtcgagcacggcagcggcctgccgccatcgcagcagacgccg
ctattgatcgtggccggcgccggctcgggcaagaccaataccctggcgcaccgggtagcg
cggctggtgctggagggcgccgatccgcaacgcatcctgctgctgaccttttcgcgccgc
gcggccggcgacatgggccgccgcgtgggccaggtgatccgccaggtactgggcctggcc
gctgccgatgccccgccgcaactgccctggtccggcaccttccacgccatcggcgcgcgc
ctgctgcgcgactacgccagcgtgatcggcctggaagacgacttcaccatccaggatcgc
ggtgactcggaagacctgatgggcctgctgcgccacgagatgggtctgtcttccaccgac
aagcgcttcccgctcaaggccacctgcctggcgatctattcgcgcgctgtcaacacccgt
caggacctggcccaggtgctgcaggtccatttcccctggtgccgcgagtgggagcggcca
ctgggcgaactcttcgcccgctatgtggatgccaaggaagcccagcacgtgctggattac
gacgatctgctgctgttctgggccgacatgttgtccgacccggaaatcgcgcaatccgtc
agcgcccgcttcgaccatgtgctggtcgatgaataccaggacaccaaccgcctgcaggcc
gagatcctgcagcgcatgaagcccgatggcgccggtgtgaccgccgtcggcgacgacgcc
caatcgatctattccttccgcggcgccacggtgcgcaacatcctcgacctgccctcgctg
ttcacccagccggcgcggctgctgacgctggaacagaactaccgctccacccagcctatc
ctgcaggcgtccaatgcagtcatcgccgatgccccggaacgccacttcaagaacctgtgg
agtgacaaaccctcctcgcagaaaccgcagctggtggtcatccccgacgaagccgaacag
gcgcgctgggttgccaaccgcatcctggcgcatcgcgaagaagggctgacgctcaagtcc
caggcagtgctgttccgcaccgccacccatagcgccgcgctggagctggaactggtccgc
cgcaacatccccttcgtgaagttcggcgggctcaagttcctggagagcacccacatcaag
gacctgctgtccctgctgcggctggcccacaaccccagcggccgcatggccggcctgcgt
gccctgcaactgattcccggggtcggcccggccaccgcccgcaaggtgctggacctgatg
gccggcgccgccgacccggccgatgccctgctccacttcggcgcaccggccaatatcgcc
ctgcagtggcaggccttcgccgatacctatgccctgatgcggcgcgccagcgcgacctgg
ccgaccgacatcaacgccgcccgcgactggtatctgccgcagctggaacaacgctacgag
gacgccgacgcccgcgccgccgacatcgagcaactggccgcgctggcccggggctatgcc
tcgcgcgagaaattcctcaccgagctgacgctggatccgcccgaatccagcagcgacttt
tcggcgccgccctatcgggatgaggattacctgacgctctccaccatccactccgccaag
ggccaggaatggcgttcggtgcatgtgctgaacgtggtggacggctgcatcccctccgac
ctggccaccggcagcgaggccgagatcgccgaagagcgtcgcctgctctatgtggccatg
acccgggccaaggaatatctgcacctgatcgtgccgcaacgcttctacatcacccagcag
acggcccagggcgaccgccacgtgaacgccatccgcagccgcttcatcaccccgcgcatg
ctgccccatttcgaggacagcctgtggctgtcggccgagaccaatggcgcccgcacaccc
atgcccgaaagcgtgcgcatgctggtacgccagcgcgccaaacaggcctggaacaagtct
tga
DBGET
integrated database retrieval system
