Herbaspirillum frisingense: G5S34_16720
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Entry
G5S34_16720 CDS
T06761
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hfr03000
]
G5S34_16720 (prpR)
Transcription factors [BR:
hfr03000
]
Prokaryotic type
Helix-turn-helix
Other families
G5S34_16720 (prpR)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
HTH_1
HTH_50
AAA_5
HTH_24
HTH_23
HTH_Tnp_ISL3
HTH_30
AAA_2
Hjc
HTH_AsnC-type
HTH_11
HTH_28
AAA
Motif
Other DBs
NCBI-ProteinID:
QNB08240
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Position
3692573..3694231
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AA seq
552 aa
AA seq
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MKRPAPTDRHADKPVIWTASVSRLSELFRDITLEFDALADIEPIHLGFDEAVREIRERLA
TQRCDVVISAGSNGAYLKSRLPVPVVVARASGFDVMQALARARQITTRIGLVSYQEEMPA
LAEFQQMFGLDIAQRTYATEEDARAVVNELKAGGIEAVVGAGLITDLAEEAGMHGIFLYS
SATVRQAFEDALELARLTQLESTRGPLLPVADSLRARHHLKDLRGDSAAMEAVRQSITLF
ARSPASVLIQGETGTGKELAAQAIHRAHPLMQGKTHASHPFVAINCGALAESLLESELFG
YEEGAFTGSRRGGRAGVFEAAHRGTLLLDEIGEMPLPLQTRLLRVLEEREVVRVGGTRPI
PVQVRIISATHCDLEARVREGRFRADLYYRLSVLRLPLPPLRARCDDVPALAEWHLKHAL
AALDARPHANLGAEILRCSPLLCAYAWPGNVRELRNLMERLALFLAAEPLQALTPALILR
VAPELAQHASMASATAQEPDVITAAPDDAQIQAVLRRYRGNRAAAARHLGMSRTTLWRRL
KQLADEVDEGQQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccctgcccccaccgaccgccacgccgacaaacccgtgatctggaccgcttcg
gtctcgcgcctgtcggagctgttccgtgacatcacgctggagttcgacgccctggccgac
atcgagcccatccacctggggttcgacgaggccgtgcgcgagatccgcgagcgcctggcc
acgcagcgctgcgacgtggtcatctcggccggctccaacggcgcctatctcaagagccgg
ctgccggtgccggtggtggtggcgcgcgccagcggcttcgacgtgatgcaggcgctggca
cgggcgcgccagatcaccacccgcatcggcctggtcagctatcaggaagagatgccggca
ctggccgagttccagcagatgttcggactggacatcgcccagcgcacctatgccaccgaa
gaagatgcgcgggccgtggtcaatgaattgaaggccggtggcatcgaggccgtggtgggt
gccggcctcatcaccgacctggccgaagaggccggcatgcacggtatcttcctgtactcc
tcggccaccgtgcgccaggccttcgaggatgcactggaactggcgcgcctgacgcaactg
gagagcacgcgtggcccgctcctgccggtggccgacagcctgcgcgcacgtcatcacctg
aaggacctgcggggcgactcggccgccatggaagcggtacggcaatcgatcacgctgttt
gcccgctcaccggccagcgtactgatccagggcgagaccggcaccggcaaggaactggcg
gcgcaagccatccatcgcgcccatccgctgatgcagggcaagacccacgcaagccatccc
ttcgtggccatcaattgcggcgcgctggcagagtcgctgctggagtccgaactgttcggc
tatgaagaaggcgccttcaccggttcgcgccggggtggccgcgccggcgtgttcgaggcg
gcccatcgcggcacgctgctactggatgaaatcggcgagatgccgctgcccctgcagacc
cgcctgctgcgcgtgctggaagagcgcgaggtggtgcgcgtcggtggcacgcggccgatc
ccggtgcaggtgcgcatcatcagcgccacccattgcgacctggaggccagggtgcgcgag
ggccgtttccgggccgacctgtactaccggctcagcgtgctgcgcctgcccctgccgccg
ctgcgtgcgcgctgcgacgacgtgccggcactggccgagtggcatctcaagcatgcactg
gcggcgctggatgcccgcccgcatgccaacctgggcgcggaaatcctgcgctgctcgccg
ctgctgtgcgcctacgcctggccgggcaatgtgcgtgaattgcgcaacctgatggaacgg
ctggccctgttcctggcggccgaaccgctgcaggcgctgacgccggccctgatcctgcgg
gtagcaccggaactggcgcagcacgccagcatggccagcgcgaccgcgcaggaaccagat
gtcatcacggccgcgcctgacgatgcgcagatccaggccgtgctgcgccgctatcgtggc
aatcgcgctgccgccgcacgccatctggggatgagccggaccaccctgtggcgccgcttg
aagcagctagcggatgaggtcgatgaaggccagcaatga
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