Herbaspirillum frisingense: G5S34_16840
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Entry
G5S34_16840 CDS
T06761
Name
(GenBank) HAMP domain-containing protein
KO
K05874
methyl-accepting chemotaxis protein I, serine sensor receptor
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr02020
Two-component system
hfr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5S34_16840
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
G5S34_16840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hfr02035
]
G5S34_16840
Bacterial motility proteins [BR:
hfr02035
]
Flagellar system
Chemotaxis proteins
MCPs
G5S34_16840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
TarH
HAMP
HAMP_2
Sigma70_ner
OGG
DUF4736
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
QNB08262
LinkDB
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Position
complement(3716790..3718571)
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AA seq
593 aa
AA seq
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MRNLTVRFSLMSALALFSCMIVVGAAVGIFALGRANHATEYVHEITERALLINDAYKDTT
RTRAAQSRIYSTLMEKGDQAVIDAAFKSAQTTYERSLKYLDDYAKLPDLEGQDPATKTEL
IESAKALNEILKKATEVLRSGDAAAYSQLNNNFISKGGARFSTALDVYQKRAMELNDKAT
TERQREYNLVVWLVVAGLIGAMFLVIGVHFMLRNIVLTPLNRAVHLLDLVANGDLTTKVD
VESKNEIGRLFAAIRSMQQALLTTVSSVRSSSDSIDTNAKEIAAGNMDLSSRTEQQASSL
EETAASMEELTGTVKQNAENALQANQLAHSASSTASKGGEVVSQVVDTMQAINESSRKIV
DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKSLID
DSVDKVEAGSQLVEQAGATMSEVVTSVQRVTDIVGEIAEASREQSTGIEQVNRAITQMDE
VTQQNAALVEEAAAAAQSLQAQATNLVAAVSIFKIDAHQVASASVKARPMPKAAPAPKAA
PAMASVSAPVAPKAAPAAAPKLPPAKPAKPAGASASSSASTRGKDDAQDWEEF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcggaatcttacggttcgcttcagcctgatgagcgcgcttgcgctgttttcttgcatg
atcgtggtcggtgctgcggtcggcatctttgccctgggccgggccaatcatgcgaccgag
tatgtgcacgagatcaccgagcgcgccttgttgatcaatgatgcctacaaggacaccacg
cgcacccgcgcagcgcagtcccgcatctattcgaccttgatggaaaagggtgaccaggca
gtgatcgacgcggccttcaagagcgcccagaccacctacgaacgtagtctcaaatacctg
gacgactacgccaaactccccgatctggagggccaggatcctgctaccaagaccgaattg
atcgaatcggccaaggccttgaacgagatcctgaagaaggccaccgaggtgctcaggagc
ggtgatgccgccgcctattcgcagctgaacaacaacttcatcagcaaggggggcgcgcgc
ttctcgaccgcgctggacgtctaccagaagcgggccatggagctcaacgacaaggccacc
accgaacgccagcgtgaatacaacctggtggtgtggctggtcgtggccggtctcatcggt
gccatgttcctggtcatcggcgtgcacttcatgctgcgcaacatcgtgctcacgcccctc
aatcgcgccgtgcacctgctggacctggtggccaatggcgacctgaccaccaaggtcgac
gtcgaaagcaagaacgagatcggtcgcctgttcgccgccatccgcagcatgcagcaggcg
ctgctgacgaccgtgtccagcgtgcgcagcagttccgacagcatcgacaccaatgccaag
gaaatcgccgccggcaacatggacctgtcctcgcgcaccgagcagcaggccagctccctg
gaagagaccgccgcctcgatggaggaattgaccggcaccgtcaagcagaacgccgagaat
gccctgcaggccaaccagctggcgcattcggcttcctccaccgccagcaagggcggcgag
gtggtgtcgcaggtggttgatacgatgcaggccatcaatgaatcctcgcgcaagatcgtg
gacatcatcagcgtgatcgacggcattgccttccagaccaacatcctggcgctcaatgca
gcggtggaagcggcccgtgccggcgagcagggccgcggctttgccgtggtggcgtcggaa
gtgcgttccctggcccagcgctcggccgctgccgccaaggaaatcaagtccctcatcgac
gattcggtggacaaggtcgaggccggcagccagctggtcgagcaggctggcgctaccatg
agcgaggtggtcaccagcgtgcagcgcgtcaccgacatcgtgggcgagatcgccgaagcc
agccgcgagcagagcaccgggattgagcaggtcaaccgggccatcacccagatggacgag
gtgacccagcagaacgcggcgctggtggaagaagctgcggccgccgcccagtccttgcag
gcgcaggccaccaacctggtggcggcggtcagcatcttcaagatcgatgcgcatcaggtc
gccagtgcgtcggtcaaggcgcgcccgatgcccaaggcagcaccggcccccaaggctgcg
cctgcgatggcgtcggtcagcgcgccggttgcgcccaaggccgctcctgctgccgcgccc
aagctgcccccggccaaaccagccaagccggctggcgcatcggcgagctcatcggccagc
acccggggcaaggacgacgcccaggattgggaagagttctga
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