Herbaspirillum frisingense: G5S34_17900
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Entry
G5S34_17900 CDS
T06761
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00230
Purine metabolism
hfr01100
Metabolic pathways
hfr01120
Microbial metabolism in diverse environments
hfr01232
Nucleotide metabolism
Module
hfr_M00958
Adenine ribonucleotide degradation, AMP => Urate
hfr_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
G5S34_17900 (xdhB)
Enzymes [BR:
hfr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
G5S34_17900 (xdhB)
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
DUF745
Motif
Other DBs
NCBI-ProteinID:
QNB08435
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All DBs
Position
3914741..3917110
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AA seq
789 aa
AA seq
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MNKQSEQFLNTLVQPPQDWATVGKPHPHESALLHVTGEATYTDDIVELQGTLHAALGLSQ
KAHARVRAIDLDKVKAATGVVAVFTATDIPGENECGAIIHDDPVLADGLVQYVGQPMFIV
VADSHDHARRAARLAVVDYEELPPILTPRAAHAAQSYVLPPMHLSRGEPAVALALAPHKL
RGQFDVGGQEQFYLEGQISYAIPKEGRGMHVYCSTQHPSEMQHHIATVLKLASHDVLVEC
RRMGGGFGGKESQSALWACAAAVAAARLRRPVKLRADRDDDMMVTGKRHCFAYDYEIGYD
DSGRIVAAKIDMISRAGFSADLSGPVATRAVCHFDNAYYLSDVEIHAMCGKTNTQSNTAF
RGFGGPQGALAIEYIIDEIARNLGRDPLEIRRNNFYGPSDEEGPGARNVTHYGQKVEDNV
IHGLVDQLEKSSRYQERRQAIADFNAGNTVLKKGLALTPVKFGISFNVPHLNQAGSLVHV
YTDGSVLVNHGGTEMGQGLNTKVAQVVANALGVPLEQVRCTATDTSKIANTSATAASTGS
DLNGKAAQDAALQIRERLAQVAARHFGVDASAIRFADGLVMAGEQSIAFVELVMKAYLQR
VQLWSDGFYSTPKVHWDAKRMHGHPFFYFAYAAAVSEVVIDTLTGEWKLLQADLLYDAGE
SLNPALDIGQVEGGFIQGMGWLTTEELWWNKDGKLMTHAPSTYKIPAISDCPEAFRTELY
RNSNVSDTIHRSKAVGEPPLLLPFSVFLAIRDAVSAVGGHRINPPLRAPATSEAILDAVD
AVRAAAAVQ
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaaagcgaacaattcctcaataccctggtacaaccaccccaggactgggcc
accgtgggcaagccgcatccgcatgaatcagccctgctgcacgtgaccggcgaagccacc
tacaccgacgacatcgtggaactgcagggaaccctgcatgcggccctgggcctgtcgcag
aaggcccatgccagggtgcgcgccatcgacctggacaaggtcaaggcggccaccggtgtg
gtggcggtcttcaccgccacggacattccgggcgagaacgaatgcggggcgatcatccac
gacgatccggtgctggccgatgggctggtgcaatacgtgggtcagccgatgttcatcgtg
gtggccgacagccacgaccatgcgcgccgcgccgcgcgcctggcggtggtcgattacgaa
gaactgccgccgatcctgacgccacgcgccgcccatgccgcgcaatcctacgtgctgccg
ccgatgcacctgtcgcgcggggaaccggcggtggccctggcgctggcgccgcacaagctg
cgcggccagttcgatgtgggcggacaggagcagttctatctggagggacagatttcctat
gccatccccaaggaggggcgcggcatgcacgtgtactgctcgacccagcaccccagcgag
atgcagcaccatatcgccaccgtgttgaaactggcctcgcacgatgtgctggtggaatgc
cggcgcatgggcggtggcttcggcggcaaggaatcgcagtcggcgctgtgggcctgcgcc
gctgccgtggcggcggcgcgcctgcgtcgtccggtcaagctgcgcgccgaccgggatgac
gacatgatggtcaccggcaagcgccactgcttcgcctacgactacgagatcggctatgac
gacagcgggcgcatcgtggcggcgaagatcgacatgatctcgcgggccggtttttcggcc
gacctgtccggcccggtggctacgcgggcggtgtgccacttcgataatgcctactacctc
tcggacgtggaaatccacgccatgtgcggcaagaccaacacccagtccaataccgccttc
cgcggtttcggcggaccgcagggggcgctggccatcgagtacatcatcgacgagatcgcc
cgcaacctgggacgtgatccgctggagatccgccgcaacaatttctacggccccagcgat
gaagaaggaccgggggcacgcaacgtcacccactatggccagaaggtggaagacaacgtc
atccacggcctggtggaccagctggaaaagagcagccgctaccaggagcggcggcaggcg
atcgccgacttcaatgccggcaatacggtgctgaagaaaggcctggcgctgacgccggtg
aagttcggcatttccttcaacgtgccgcacctgaaccaggccggttcgctggtgcacgtc
tataccgatggctcggtgctggtgaaccatggcggcacggagatggggcaagggctcaat
accaaggtggcgcaggtggtggccaatgcgctgggcgtgccgctggagcaggtgcgctgc
accgcgaccgacaccagcaagatcgccaacacctcggccaccgccgcctccaccggtagc
gacctcaacggcaaggccgcgcaggatgcggccctgcagatccgcgaacggctggcccag
gtggcggcccggcatttcggcgtggacgcatcggccatccgctttgccgatgggctggtg
atggccggcgagcaatcgatcgccttcgtcgaactggtgatgaaggcttacctgcaacgg
gtgcagctgtggtccgatggcttctattccacacccaaggtgcattgggatgccaagcgc
atgcacggccatcccttcttctacttcgcctatgcggcggcggtgtcggaagtggtgatc
gataccctgaccggggagtggaaactgctgcaggccgacctgctgtacgacgccggagaa
agcctgaacccggcgctggacatcggccaggtcgagggtggcttcatccagggcatgggc
tggctgaccaccgaggaactgtggtggaacaaggacggcaagctgatgacgcacgccccc
tcgacctacaagatcccggccatctcggattgcccggaagccttccgcaccgagctgtat
cgcaacagcaatgtctccgacaccatccaccgctccaaggcagtgggcgagccgccgctg
ctgctgccgttctcggtgttcctggccatacgcgatgcggtctcggcagtgggtgggcat
cgcatcaacccgccattgcgcgcaccggccaccagcgaggccatcctcgatgcggtcgat
gcggtccgcgcggcggcagcggtgcagtaa
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