Herbaspirillum frisingense: G5S34_18060
Help
Entry
G5S34_18060 CDS
T06761
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00260
Glycine, serine and threonine metabolism
hfr00400
Phenylalanine, tyrosine and tryptophan biosynthesis
hfr01100
Metabolic pathways
hfr01110
Biosynthesis of secondary metabolites
hfr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5S34_18060 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
G5S34_18060 (trpB)
Enzymes [BR:
hfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
G5S34_18060 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
ComFB
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
QNB08464
LinkDB
All DBs
Position
complement(3953273..3954532)
Genome browser
AA seq
419 aa
AA seq
DB search
MKELNPLGSFAERQAVPVAALHQSAHYNLPDARGHFGPYGGSFVSETLTLALNELREAYA
RYQHDEQFLAEFHTELKHFVGRPSPVYHAKRWSEQAGGAQIYFKREDLNHTGAHKINNVI
GQALLAKRMGKKRIIAETGAGQHGVATATICARFGMECIVYMGAEDVKRQLQNVYRMNLL
GAKVVPVESGSKTLKDALNEAMRDWVTNVETTFYIIGTVAGPHPYPMMVRDFQSVIGNEC
IQQMPEIASRQPDYVVAAVGGGSNAMGIFYPYIDYADVKLVGVEAAGDGLDTGRHSASLT
LGSPGVLHGNRTYLLQDANGQIIETHSVSAGLDYPGVGPEHAWLKDSGRASYACITDEEA
LQAFNTCCRIEGIIPALESSHALAHAAKLAATLPKDQIVLVNLSGRGDKDMHTVQQRQG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaccccctcggcagctttgccgagcgccaggccgttcccgtcgccgcc
ctgcaccagtcggcccactacaacctgccggatgcacgtggccacttcggcccctacggc
ggcagcttcgtctccgaaaccctgaccctggccctgaacgagctgcgcgaggcctatgcc
cgttaccagcacgatgaacagttcctcgccgaattccacaccgaactgaagcatttcgtc
ggccgtcccagccccgtgtaccacgccaagcgctggtccgagcaggccggcggtgcgcag
atctacttcaagcgcgaagacctcaaccacaccggcgcccacaagatcaacaacgtgatc
ggccaggcattgctggccaagcgcatgggcaagaagcgcatcatcgccgagaccggcgcc
ggccagcacggcgtggccacggccaccatttgcgcccgcttcggcatggaatgcatcgtc
tacatgggcgcggaagacgtgaagcgccagctgcagaacgtgtaccgcatgaacctgctg
ggcgccaaggtggtgccggtggaatccggctccaagaccctgaaggatgcgctcaacgaa
gccatgcgcgactgggtcaccaatgtcgagaccaccttctacatcatcggcaccgtggcc
ggcccgcacccctacccgatgatggtgcgcgacttccagtcggtgatcggcaacgagtgc
atccagcagatgcccgagatcgcctcgcgtcagccggactacgtggtggcggccgtcggt
ggcggctccaatgccatgggtatcttctatccctacatcgactatgccgatgtgaagctg
gtcggcgtggaagccgccggtgacggtctcgataccggtcgccattcggcctcgctgacc
ctgggctcgcccggcgtgctgcacggcaaccgcacctacctgctgcaggatgccaacggc
cagatcatcgagacccactcggtctcggccggcctggattatccgggcgtggggccggaa
cacgcatggctcaaggacagcggccgcgccagctatgcctgcatcacagacgaagaggca
ctgcaggccttcaacacctgctgccgcatcgaaggcatcatcccggcgctggagtccagc
catgccctggcccatgcggccaagctggcggcgaccctgcccaaggatcagatcgtgctg
gtcaacctgtccggccgtggggacaaggacatgcataccgtgcaacagcgccagggctga
DBGET
integrated database retrieval system
