KEGG   Herbaspirillum frisingense: G5S34_19150
Entry
G5S34_19150       CDS       T06761                                 
Name
(GenBank) autotransporter domain-containing protein
  KO
K12678  autotransporter family porin
Organism
hfr  Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:hfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hfr02000]
    G5S34_19150
   02044 Secretion system [BR:hfr02044]
    G5S34_19150
Transporters [BR:hfr02000]
 Other transporters
  Pores ion channels [TC:1]
   G5S34_19150
Secretion system [BR:hfr02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   G5S34_19150
SSDB
Motif
Pfam: Autotransporter
Other DBs
NCBI-ProteinID: QNB08657
LinkDB
Position
4206960..4210730
AA seq 1256 aa
MQSKRSFAHARPLPVSALATLLLIGSTAHAQVASWTGNVNNNWTNDSNWQWTGAAPTPTD
DAVINAYPGVDPVLSSNTTIRALTVGGSTVGNLQINQATLNTSSVLIGNSNGSNGTITVT
GSGTNGSARLNSSGDATVGLNGVGSLTLDAGAVANVSGTTYVGGASGGVGNLTINTDSSL
IGNGLVIGNTGAVGTMLLDGGVVNMSGSVVLGSGGGSNGSASLVNGAQWLIGDRLTVGSG
GSARLSITGGSTVDSVTGVIGTAGSTLATVNISGAGSRWTNSGSLFVGTVNNGNLTISAG
ANVNSANTVIGRQDTSNSSVSVSGAGSSLAAGNLTVGGDAGSGASGGTGWLTVSSGANAT
AAVVHLGDVTGARGTLTVDNANFTASDRLSIGYGNGASGNLSISNGGVVTDTGALVGHLA
GSSGNVTVSGSGSKWINTGVLYVGNVGNGNLTISGGGNVTSTDGYVGSEAGSNSNALITG
SGSVWNHSGDFFVGHNNGASGSVVISAGGRINDVQGLLGDLNGASGSMTVTGAGSTWSSS
SDVNVGRLGNGTLTISDGGQVTGNRSYIANNANSNGSVTLTGANSAWITTNALHVGAGGN
GTLTISDGARATASVIRIATSSGSTGTLNVGAAPGSTAAAPGQLDTTSLAFGAGNGTLNL
NHNASGSSNYTLAAAISGNGTINQLAGETVFSGNSTSFTGSTNVNGGKLNVNGVLGGTVR
VNSGGTLSGSGTVGSTTVAAGGTLATAGTSTLTVQGNLNLQDGATTQVSTSADGSGGLIQ
VNGNAALAGSLSIAAGSGAYALSTPYTIVSTTGTVSGSFNAVRSDFAFVSPTVSYTGNAV
QLTMARNGNSYASVTTTGNQASVANALAQAGQLASLSSAMRAKLALIDGLSAAQARSAFE
SLGGRAYQGLSTLGLMGQSLQTLGNRNIGGGSAFSGGSGFAMSQLQLASAETDRYDYQYS
AATMTDSSNGSSGLWPLRVREDGGAWAQVAGGHGNTRSDGNADGYTSNSNGLLMGVERVL
DDRWSMGLAYHYDNTRLAYNTAGDSAKVEGHQVAVYAQYQSGDWRFKGIVGYGRNQYATQ
RSIVIGNDVSRAAGDYNGDELGLHAEASYRIDRGSYVFEPLVSLQGTLLRQDAFSETGAG
ALGLNASAQTSRSAVSMVGARWHLPLREDGKLQSELRAFWSHQWLDAGGSLNASFQGAPG
VNFQVAGLQQKRDGLVLGAGLSGRLGQASTLFLDYNLGLNDLQTQHAVVAGWRYRW
NT seq 3771 nt   +upstreamnt  +downstreamnt
atgcaatcgaagcgtagcttcgcccatgcaagaccgttgcccgtcagcgcgctggccacg
ctgctgctgatcggcagcaccgcgcacgcccaggtcgcgtcgtggaccggcaacgtcaac
aacaactggaccaacgacagcaactggcaatggacgggggcggcacccacgcccacggat
gatgcggtcatcaacgcctatcccggtgtcgatccggtgctttccagcaacaccaccatc
cgggcactgaccgtcggcggcagtacggtgggcaatctgcagatcaaccaggcgacgctg
aacacctcgtcggtcctgatcggcaacagcaacggttccaacggcaccatcaccgtcacc
ggcagcggcaccaatggcagcgccaggctcaacagcagcggcgatgcgaccgtcggcctc
aatggcgtcggatcgttgacgcttgacgccggcgcggtcgccaacgtcagcggcaccacc
tatgtcggtggtgccagcggtggcgtaggcaacctcacgatcaataccgacagcagcctg
atcggcaacggcttggtcatcggcaacaccggggcggtcggcacgatgctgctcgatggc
ggcgtcgtcaacatgagtggctcggtggtattgggtagcggtggcggcagcaatggcagc
gccagcctggtcaacggagcgcaatggctgatcggcgaccgcctcaccgtcggcagtggc
ggcagcgcccgcctttccatcaccggtggctccacggtggattccgtcactggtgtgatc
ggtaccgccggcagcacactggccaccgtcaatatcagcggtgccggcagtcgctggacc
aatagcggttcgctcttcgtgggcacggtcaacaatggcaatctcaccatcagcgccggt
gccaatgtcaacagcgccaatacggtgatcgggcgccaggacacctccaacagcagcgtc
agtgtcagcggcgccggttcttcgctggcggcgggcaacctgaccgtgggcggtgacgcc
ggctccggtgccagtggcggcaccggatggctcaccgtcagcagtggcgccaatgccacc
gcggcggtcgtgcatctgggtgacgtcactggcgcgcgcggcacgctcacggtcgacaat
gccaacttcaccgccagcgatcgtctctcgatcggctatggcaatggcgccagcggcaac
ctcagcatcagcaacggcggcgtggtcaccgataccggcgccctggtcggccacctggcc
ggcagcagcggcaatgtcaccgtgtccggcagcggcagcaagtggatcaacaccggcgtg
ctctacgtgggcaacgtcggcaacggcaacctgaccatctcgggaggcggcaacgtcacc
agcaccgatggctatgtgggcagcgaagcggggtccaacagcaacgccctgatcaccggc
agcggctcggtctggaaccactcgggagacttctttgtcggccacaacaatggcgcctcg
ggcagcgtagtcatctcggccgggggccgtatcaacgatgtgcagggcctgctgggcgac
ctcaatggcgcctccggcagcatgacggtgaccggggccggctccacctggagcagcagc
tcggacgtcaacgtcggtcgtctgggcaacggtacgctgaccatctccgatggcggccag
gtcaccggcaaccgcagctatatcgccaacaatgccaacagcaacggcagcgtgacgctg
accggtgccaactcggcctggatcaccaccaatgccttgcatgtcggggccggtggcaat
ggcaccctgaccatcagcgacggcgcgcgcgctaccgcctcggtgatccgcatcgccacc
agcagtggttccacaggtaccctcaacgtcggtgccgcccctggcagcacggcagccgcg
cccggccagctcgacaccacatcgctggccttcggcgccggcaacggtacgctgaacctg
aaccacaatgccagcggcagcagcaactacacgctggcagcggccatctcgggcaatggc
acgatcaaccagctggccggcgaaacggtcttcagcggcaactcgaccagttttaccggc
agcaccaatgtcaatggcggcaagctcaatgtcaacggcgtgctgggcggcacagtgcgc
gtcaacagtggcggtaccctctccggcagcggcacggtgggcagcaccacggtggccgcc
ggtggcacgctggccacggccggcacttcgacgctgacggtccagggcaatctgaacctg
caggacggcgccaccacccaggtcagcaccagcgccgacggcagcggcggcctgatccag
gtcaacggcaatgccgccctggccggcagcctgtccatcgccgccggcagcggcgcctat
gcgctgagcacgccctataccatcgtgtcgaccaccggcaccgtgagcggcagcttcaat
gccgtgcgcagcgacttcgcctttgtctcgcctacggtcagctacaccggcaatgcggtg
caattgacgatggcgcgcaacggcaacagctatgcctcggtcaccaccaccggcaaccag
gccagcgtggccaatgccttagcccaggccggccagttggcaagcctgtccagcgccatg
cgtgccaagctggcgctgatcgacggcctgtcggcggcgcaggcgcgcagcgccttcgag
agcctgggggggcgcgcctatcagggcctgtccacgctgggcctgatgggccaatcgctg
cagaccctgggcaaccgcaacatcggcggcgggtccgccttctccggcggcagcggtttt
gcgatgagccagctgcaactggcctcggccgagacggatcgctatgactaccagtacagc
gccgccaccatgaccgacagcagcaatggcagcagcggtctgtggcccctgcgtgtgcgc
gaagatggcggcgcctgggcgcaggttgcgggcggccatggcaatacccgctccgacggc
aacgccgacggctacaccagcaacagcaatggtctgctgatgggggtggaacgggtgctg
gatgatcgctggagcatgggcctggcctatcactacgacaatacccgcctggcctacaac
accgccggcgacagcgccaaggtggaaggccatcaggtcgccgtgtacgcgcagtaccag
agcggtgactggcgcttcaagggcatcgtcggttatggccgcaaccagtacgctacccag
cgcagcatcgtgatcggcaatgatgtctcgcgcgcggccggtgactacaacggcgatgaa
ctgggcctgcatgccgaggccagctatcgtatcgatcgtggcagctacgtgttcgagccg
ctggtctcgctgcaaggcacgctgctgcgccaggacgccttctccgaaaccggtgccggt
gcgctcggcctcaatgccagtgcgcagacttcgcgctcggcggtatcgatggtgggtgcc
cgctggcacctgcccctgcgcgaagacggcaagttgcagagcgagctgcgcgcattctgg
agccatcaatggctggatgccggcggtagcctcaatgcctccttccagggcgcgccgggc
gtcaacttccaggtcgccggcctgcaacagaagcgcgatggcctggtgctgggtgccggg
ctgtccggcaggctggggcaggcgtccaccctgttcctcgactacaacctgggcttgaac
gacctgcagacccagcacgccgtggtggcgggctggcgttatcgctggtaa

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