Herbaspirillum frisingense: G5S34_19310
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Entry
G5S34_19310 CDS
T06761
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00540
Lipopolysaccharide biosynthesis
hfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
G5S34_19310
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hfr01005
]
G5S34_19310
Enzymes [BR:
hfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
G5S34_19310
Lipopolysaccharide biosynthesis proteins [BR:
hfr01005
]
Core region
G5S34_19310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
QNB08686
LinkDB
All DBs
Position
complement(4246369..4247655)
Genome browser
AA seq
428 aa
AA seq
DB search
MDEKPMLPKLMHWLLFVVAAVFVVLGMSVDRLAGISYHLLLLLAVVAIFMRGRRSLASYG
ASWKTLWPLYLAVSGFTICLVLSQAMIGNGSVKDFNIALRFQGFMVLCWAFSQMPQRLFR
WLGTAFALATLVATVKIYWLTGGGVSREHVNFMPILAYSELAAILGTLAVFSIKWDAELP
ESMRKALMALKLLSGLGGIYCIYLYQSRGAWLAIPIFVIVGCVVFVPGRNRLFKISAALL
VMIAIATLYSSSENIRQRLMSVQSDLVSFESKSDLNTSVGTRLQLWNGSLRLYREHPFIG
VGVNGYSNALGKLAKEGIISPEAAYYPHSHNEFLFIAVVFGTCGVVALLALYLVPIVFFC
CYGARQSETARVTAMMGLVLCLAFVSDGLVDVMFIWRECSLFYTVLLSLLMAALLRWRRP
APEYLGTS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaagccgatgttgccaaagctcatgcattggttgttgtttgtcgttgcggct
gtcttcgtggtcttggggatgtccgtcgatcgtctggccgggatcagctaccacctgttg
ttgttgcttgcggtcgtcgccattttcatgcgtggacggcgttcactcgccagctatggc
gcttcctggaagacgctttggcctctctacctggctgtttcgggcttcaccatctgtctg
gtcctgagccaggcaatgattggcaacgggtcggtcaaggatttcaatattgccttgcgc
ttccagggcttcatggtcttgtgctgggcgttttcccagatgccacaacgactcttccgc
tggttgggaacagcattcgcgctggccaccctggtggccacagtgaaaatctactggctg
acaggcggcggagtgtcgcgggaacatgtcaacttcatgcccatccttgcctactccgag
ctggcagccattcttggaaccttggcagtgttcagcatcaaatgggatgccgagctcccc
gagtcaatgcgaaaagccctgatggcgctgaaactgctttcagggctcggcggcatctat
tgtatctacctttaccagtcacgcggcgcctggctggccataccgatcttcgtcattgtc
gggtgtgtggtgtttgttcctggtagaaaccggctgttcaagattagcgcagcgctcctg
gtaatgatcgccatcgctaccctatacagttcgagcgagaacatcaggcagcgtctgatg
agtgtccagagcgatctggtttccttcgaaagcaagtccgacctgaacacctccgtcggg
acgcgcctgcaattgtggaacggttcgctgcgactttatcgagagcatccattcatcggt
gtgggcgtcaatggctattccaatgcgctgggtaagctggccaaggaaggtatcatcagc
ccggaggctgcctattatccacactcccataacgaattcctgtttatcgcagtcgttttc
ggtacttgtggtgtagtggcactattggccctgtatcttgtccctatagtcttcttctgc
tgctatggtgccagacaatcagagactgcccgggtgaccgcaatgatgggcttggtgttg
tgccttgccttcgtttccgacggcttggtggacgtgatgttcatctggcgtgagtgcagc
ctgttctacacggtcctgctgtcactgctgatggcggcgcttttgcgctggcgcaggcct
gctcccgagtatctcggcacctcttga
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